RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	SRRM5	B3KS81	715 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	WNT9B	O14905	357 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	SULT1B1	O43704	296 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	NOS1AP	O75052	506 aa	Predicted RBP	4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	ALDOB	P05062	364 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	OCM2	P0CE71	109 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	HSMCR30	P0CW71	290 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	EGR1	P18146	543 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	ATF1	P18846	271 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	GADD45A	P24522	165 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	AZGP1	P25311	298 aa	Known RBP	4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	SOX2	P48431	317 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	QRFP	P83859	136 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	NKPD1	Q17RQ9	610 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	PCGF3	Q3KNV8	242 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	C1orf100	Q5SVJ3	147 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	FAM201A	Q5SY85	155 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	XP32	Q5T750	250 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	PRSS57	Q6UWY2	283 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	CDH24	Q86UP0	819 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	SERPINA12	Q8IW75	414 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZDHHC23	Q8IYP9	409 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF525	Q8N782	197 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	SCCPDH	Q8NBX0	429 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR2Z1	Q8NG97	314 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR52N4	Q8NGI2	321 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR13C9	Q8NGT0	318 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	C10orf105	Q8TEF2	133 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	NEU4	Q8WWR8	484 aa	Predicted RBP	4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	AQP3	Q92482	292 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	PIGC	Q92535	297 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	UFD1	Q92890	307 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	DACT3	Q96B18	629 aa	Predicted RBP	4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	SEH1L	Q96EE3	360 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	SPACA5	Q96QH8	159 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	CENPO	Q9BU64	300 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMED9	Q9BVK6	235 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	PAPOLG	Q9BWT3	736 aa	Known RBP	4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	COMMD4	Q9H0A8	199 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	NOX4	Q9NPH5	578 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	GPR173	Q9NS66	373 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	TXNL4B	Q9NX01	149 aa	Known RBP	4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	TAS2R4	Q9NYW5	299 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	MTCH1	Q9NZJ7	389 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	GTF2A1L	Q9UNN4	478 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	FOXJ3	Q9UPW0	622 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	TLN2	Q9Y4G6	2542 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	IGHV4-30-2	A0A087WSY4	118 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	IGHV3-64D	A0A0J9YX35	117 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	PLSCR5	A0PG75	271 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM210	A6NLX4	147 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	ANKRD30BL	A7E2S9	258 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM178B	H3BS89	294 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	CDIPT	O14735	213 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	SYNGR1	O43759	233 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	GATB	O75879	557 aa	Known RBP	4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	GABARAP	O95166	117 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	IGHV2-70	P01814	119 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	SFTPB	P07988	381 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	RPSA	P08865	295 aa	Known RBP	4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	PGA5	P0DJD9	388 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	CD36	P16671	472 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF12	P17014	697 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	SRM	P19623	302 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	PSMA1	P25786	263 aa	Known RBP	4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	PSMB9	P28065	219 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	GPM6A	P51674	278 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	GNG3	P63215	75 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	TNFAIP6	P98066	277 aa	Predicted RBP	4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	KRTAP1-1	Q07627	177 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	KISS1	Q15726	138 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	MOG	Q16653	247 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	BIVM	Q86UB2	503 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	ANGPTL5	Q86XS5	388 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	ANKRD13B	Q86YJ7	626 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	FTMT	Q8N4E7	242 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	SPERT	Q8NA61	448 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	WFDC11	Q8NEX6	87 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR13C3	Q8NGS6	347 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	PHYHIP	Q92561	330 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	ERGIC1	Q969X5	290 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	SPSB1	Q96BD6	273 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	TECTB	Q96PL2	329 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	FUNDC2	Q9BWH2	189 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	MRPS26	Q9BYN8	205 aa	Known RBP	4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	RAB1B	Q9H0U4	201 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	WDR13	Q9H1Z4	485 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	CXorf56	Q9H5V9	222 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	METTL17	Q9H7H0	456 aa	Predicted RBP	4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	SAP30L	Q9HAJ7	183 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	DLL4	Q9NR61	685 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM106B	Q9NUM4	274 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF222	Q9UK12	451 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	DHDH	Q9UQ10	334 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	PMF1-BGLAP	U3KQ54	211 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	NSD1	Q96L73	2696 aa	Predicted RBP	4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	ABCA1	O95477	2261 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	CSPG4	Q6UVK1	2322 aa		4.14	□□□□□ -1.75
LMNB1-208	ENST00000504788	TRAV1-2	A0A0B4J238	106 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms