RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 A6NIN4 97 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 NPFFO15130 113 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 SYNGR1O43759 233 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 ACAA1P09110 424 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-208ENST00000494728 GLRA1P23415 457 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 SAA4P35542 130 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 PROK1P58294 105 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 GNG3P63215 75 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 EFNB1P98172 346 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 CEACAM21Q3KPI0 293 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 PLCXD3Q63HM9 321 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 HIST2H2BDQ6DRA6 164 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 HAGHLQ6PII5 290 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-208ENST00000494728 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 Q6ZSV7 163 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 SSX6Q7RTT6 188 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 COMMD2Q86X83 199 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 ZNF679Q8IYX0 411 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 CD177Q8N6Q3 437 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 FAM81AQ8TBF8 368 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 DYRK2Q92630 601 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 CNN2Q99439 309 aaKnown RBP9.52□□□□□ -0.89
VTI1A-208ENST00000494728 APOL4Q9BPW4 351 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 YY1AP1Q9H869 796 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 ABCB9Q9NP78 766 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 C19orf12Q9NSK7 152 aa9.52□□□□□ -0.89
VTI1A-208ENST00000494728 NUFIP1Q9UHK0 495 aaKnown RBP9.52□□□□□ -0.89
VTI1A-208ENST00000494728 A0A1B0GTI1 187 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 GPR37O15354 613 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 GSC2O15499 205 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 DNAJC8O75937 253 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-208ENST00000494728 CRYBA1P05813 215 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 NDUFB7P17568 137 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 MAP2K3P46734 347 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 GABRA2P47869 451 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 CAV3P56539 151 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 ERVFRD-1P60508 538 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 CXCR4P61073 352 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 SNCBQ16143 134 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 LCN1P1Q5VSP4 162 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 AADACL4Q5VUY2 407 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 SLX4IPQ5VYV7 408 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 C12orf73Q69YU5 71 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 DEGS2Q6QHC5 323 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 ZNF322Q6U7Q0 402 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-208ENST00000494728 C17orf107Q6ZR85 190 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 MOB3CQ70IA8 216 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 TMEM185AQ8NFB2 350 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 TBC1D15Q8TC07 691 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 BCAS4Q8TDM0 211 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 DUS3LQ96G46 650 aaKnown RBP9.51□□□□□ -0.89
VTI1A-208ENST00000494728 MROQ9BYG7 248 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 GPR173Q9NS66 373 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 MRM2Q9UI43 246 aaKnown RBP9.51□□□□□ -0.89
VTI1A-208ENST00000494728 VPREB3Q9UKI3 123 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 IKZF2Q9UKS7 526 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 PIGLQ9Y2B2 252 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 RNF114Q9Y508 228 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 NOTCH3Q9UM47 2321 aa9.51□□□□□ -0.89
VTI1A-208ENST00000494728 A0A1B0GUS0 222 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 A0A1W2PQ09 198 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 MEIOCA2RUB1 952 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 OR5B21A6NL26 309 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 H3BSH0 61 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 M0R1W7 72 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 DHRS3O75911 302 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 APOL3O95236 402 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 TSPAN15O95858 294 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 FBP1P09467 338 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 PGA5P0DJD9 388 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 HOXB6P17509 224 aaKnown RBP9.5□□□□□ -0.89
VTI1A-208ENST00000494728 RIDAP52758 137 aaKnown RBP9.5□□□□□ -0.89
VTI1A-208ENST00000494728 RPL15P61313 204 aaKnown RBP9.5□□□□□ -0.89
VTI1A-208ENST00000494728 DEFA6Q01524 100 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 ATP6AP1Q15904 470 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 ZNF829Q3KNS6 432 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-208ENST00000494728 TMEM42Q69YG0 159 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 ASPHD2Q6ICH7 369 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 KCTD18Q6PI47 426 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-208ENST00000494728 ACP7Q6ZNF0 438 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 MEPCEQ7L2J0 689 aaKnown RBP9.5□□□□□ -0.89
VTI1A-208ENST00000494728 CALHM1Q8IU99 346 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 SLC35F2Q8IXU6 374 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 CMTM4Q8IZR5 234 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 FAM185AQ8N0U4 392 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 C11orf42Q8N5U0 333 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 TCEANCQ8N8B7 351 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 ZSCAN4Q8NAM6 433 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-208ENST00000494728 POC1AQ8NBT0 407 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 OR5K1Q8NHB7 308 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 DNAJC9Q8WXX5 260 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 RORBQ92753 470 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 NRBF2Q96F24 287 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 SDSLQ96GA7 329 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 IL4I1Q96RQ9 567 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 GABARAPL1Q9H0R8 117 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 KRT84Q9NSB2 600 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 GTF2A1LQ9UNN4 478 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 SLC22A13Q9Y226 551 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms