RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 SCN3BQ9NY72 215 aa9.76□□□□□ -0.85
CLIP2-207ENST00000487447 POLR3KQ9Y2Y1 108 aaPredicted RBP9.76□□□□□ -0.85
CLIP2-207ENST00000487447 LSM2Q9Y333 95 aaKnown RBP9.76□□□□□ -0.85
CLIP2-207ENST00000487447 TPRKBQ9Y3C4 175 aa9.76□□□□□ -0.85
CLIP2-207ENST00000487447 SIRT4Q9Y6E7 314 aaPredicted RBP9.76□□□□□ -0.85
CLIP2-207ENST00000487447 OOEPA6NGQ2 149 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 A6NLC8 198 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 CDIPTO14735 213 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 NOS1APO75052 506 aaPredicted RBP9.75□□□□□ -0.85
CLIP2-207ENST00000487447 MSMBP08118 114 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 WNT2P09544 360 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 EGR1P18146 543 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 GPM6AP51674 278 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 DVL1P1P54792 670 aaPredicted RBP9.75□□□□□ -0.85
CLIP2-207ENST00000487447 TAS2R43P59537 309 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 FAM201AQ5SY85 155 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 ZNF529Q6P280 563 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 DCDC5Q6ZRR9 648 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 GATAD2BQ8WXI9 593 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 AQP3Q92482 292 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 SGCDQ92629 289 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 RPL3LQ92901 407 aaKnown RBP9.75□□□□□ -0.85
CLIP2-207ENST00000487447 MYDGFQ969H8 173 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 C12orf43Q96C57 262 aaKnown RBP9.75□□□□□ -0.85
CLIP2-207ENST00000487447 CNBD2Q96M20 576 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 PDCD1LG2Q9BQ51 273 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 PKIBQ9C010 78 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 NARFLQ9H6Q4 476 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 GPR173Q9NS66 373 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 UBAP1Q9NZ09 502 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 HIVEP2P31629 2446 aa9.75□□□□□ -0.85
CLIP2-207ENST00000487447 DNHD1Q96M86 4753 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 TRAV38-1A0A0B4J264 116 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 PPIAL4CA0A0B4J2A2 164 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 IGKV1-9A0A0C4DH69 117 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 ISPDA4D126 451 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 A6NIN4 97 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 J3QT63 122 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 MYL12BO14950 172 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 NDUFA2O43678 99 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 PLPP2O43688 288 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 MUC1P15941 1255 aaPredicted RBP9.74□□□□□ -0.85
CLIP2-207ENST00000487447 CD80P33681 288 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 FUT6P51993 359 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 RPS11P62280 158 aaKnown RBP eCLIP9.74□□□□□ -0.85
CLIP2-207ENST00000487447 HOXA4Q00056 320 aaPredicted RBP9.74□□□□□ -0.85
CLIP2-207ENST00000487447 CNN3Q15417 329 aaKnown RBP9.74□□□□□ -0.85
CLIP2-207ENST00000487447 KCNJ8Q15842 424 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 ASPHD2Q6ICH7 369 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 FAM166AQ6J272 317 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 PRSS48Q7RTY5 328 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 ZNF573Q86YE8 665 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 POC1AQ8NBT0 407 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 LRRC29Q8WV35 223 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 DACT3Q96B18 629 aaPredicted RBP9.74□□□□□ -0.85
CLIP2-207ENST00000487447 SPSB1Q96BD6 273 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 FGGYQ96C11 551 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 MND1Q9BWT6 205 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 METTL17Q9H7H0 456 aaPredicted RBP9.74□□□□□ -0.85
CLIP2-207ENST00000487447 ERVK-18Q9QC07 812 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 KAAG1Q9UBP8 84 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 MIOXQ9UGB7 285 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 ERGIC3Q9Y282 383 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 LRCH1Q9Y2L9 728 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 FBN3Q75N90 2809 aa9.74□□□□□ -0.85
CLIP2-207ENST00000487447 ABCA1O95477 2261 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 MALRD1Q5VYJ5 2156 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 IGKV1-27A0A075B6S5 117 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 TRAV20A0A0B4J274 112 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 TRBV5-5A0A0J9YX44 114 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 hCG_1807616A0A1W2PRN6 198 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 A8MV72 311 aaPredicted RBP9.73□□□□□ -0.85
CLIP2-207ENST00000487447 PTGES3LE9PB15 166 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 H3BSH0 61 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 RGS10O43665 173 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 MRPS14O60783 128 aaKnown RBP9.73□□□□□ -0.85
CLIP2-207ENST00000487447 RHBDL1O75783 438 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 SERPINA3P01011 423 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 PGA5P0DJD9 388 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 ATF1P18846 271 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 AZGP1P25311 298 aaKnown RBP9.73□□□□□ -0.85
CLIP2-207ENST00000487447 GABARAPL2P60520 117 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 IL24Q13007 206 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 YIF1BQ5BJH7 314 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 ATPAF1Q5TC12 328 aaPredicted RBP9.73□□□□□ -0.85
CLIP2-207ENST00000487447 STUMQ69YW2 141 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 CRIP3Q6Q6R5 217 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 ZNF841Q6ZN19 808 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 KCTD8Q6ZWB6 473 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 FAM90A1Q86YD7 464 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 CALHM1Q8IU99 346 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 OR13C3Q8NGS6 347 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 OR51F2Q8NH61 342 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 GPR148Q8TDV2 347 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 NEIL1Q96FI4 390 aaPredicted RBP9.73□□□□□ -0.85
CLIP2-207ENST00000487447 NRIP2Q9BQI9 281 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 DNTTIP1Q9H147 329 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 Q9H521 79 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 HES4Q9HCC6 221 aa9.73□□□□□ -0.85
CLIP2-207ENST00000487447 ISYNA1Q9NPH2 558 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms