RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 SNRPGP62308 76 aaKnown RBP19.33■□□□□ 0.68
C9orf3-215ENST00000478473 SLC9A3R2Q15599 337 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 CDONQ4KMG0 1287 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 CLVS2Q5SYC1 327 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 METTL11BQ5VVY1 283 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 METAP1DQ6UB28 335 aaPredicted RBP19.33■□□□□ 0.68
C9orf3-215ENST00000478473 COMMD2Q86X83 199 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 CATSPERDQ86XM0 798 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 KIR3DL3Q8N743 410 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 CCDC54Q8NEL0 328 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 ST8SIA4Q92187 359 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 GAFA1Q96PS6 74 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 PCGF1Q9BSM1 259 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 DCTN5Q9BTE1 182 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 NOX4Q9NPH5 578 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 RASL12Q9NYN1 266 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 NLKQ9UBE8 527 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 DNAJB11Q9UBS4 358 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 METTL15A6NJ78 407 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 J3QRE1 110 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 EI24O14681 340 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 SIGLEC5O15389 551 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 ACAA1P09110 424 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-215ENST00000478473 CAV3P56539 151 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 LRRC10Q5BKY1 277 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 MOB3CQ70IA8 216 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 FGFRL1Q8N441 504 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 OR5T2Q8NGG2 359 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 RORBQ92753 470 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 RNF166Q96A37 237 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-215ENST00000478473 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.32■□□□□ 0.68
C9orf3-215ENST00000478473 SLC22A13Q9Y226 551 aa19.32■□□□□ 0.68
C9orf3-215ENST00000478473 PQLC2LA1A4F0 135 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 OR2AT4A6NND4 320 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 GLRA1P23415 457 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 MPZP25189 248 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 ARF6P62330 175 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 IL13RA1P78552 427 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 OCLNQ16625 522 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 DGUOKQ16854 277 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 DEFB112Q30KQ8 113 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 PLCXD3Q63HM9 321 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 BRD3OSQ6XYD6 125 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 PLEKHG7Q6ZR37 379 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 C1orf122Q6ZSJ8 110 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 POC1AQ8NBT0 407 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 UBE2FQ969M7 185 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 SLC25A28Q96A46 364 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 SDSLQ96GA7 329 aa19.31■□□□□ 0.68
C9orf3-215ENST00000478473 IGKV1D-17A0A075B6S4 117 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 IGHV1-69DA0A0B4J2H0 117 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 A0A1B0GVI7 797 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 NKX6-3A6NJ46 265 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 IGHV1-69P01742 117 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 PSG2P11465 335 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 ZNF85Q03923 595 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 FOXL1Q12952 345 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 AWAT1Q58HT5 328 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 MEDAGQ5VYS4 303 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 HAGHLQ6PII5 290 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-215ENST00000478473 ZNF573Q86YE8 665 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 TMEM86BQ8N661 226 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 YIPF7Q8N8F6 280 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 TMIGD2Q96BF3 282 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 TBX5Q99593 518 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 SNTG1Q9NSN8 517 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 ORC6Q9Y5N6 252 aa19.3■□□□□ 0.68
C9orf3-215ENST00000478473 J3QT63 122 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 HAX1O00165 279 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 PGA5P0DJD9 388 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 SELLP14151 372 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 Q6YL49 198 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 OR10H4Q8NGA5 316 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 GATAD2BQ8WXI9 593 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 UNKLQ9H9P5 680 aaKnown RBP19.29■□□□□ 0.68
C9orf3-215ENST00000478473 IMPAD1Q9NX62 359 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 MAB21L2Q9Y586 359 aa19.29■□□□□ 0.68
C9orf3-215ENST00000478473 EBAG9O00559 213 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 APOL3O95236 402 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 GABRB1P18505 474 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 ATP6V1E1P36543 226 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 DMRTC1Q5HYR2 192 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 FDX2Q6P4F2 183 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 KCTD20Q7Z5Y7 419 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 CBR4Q8N4T8 237 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 C10orf35Q96D05 121 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 DUX5Q96PT3 197 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 HES4Q9HCC6 221 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 ACOXLQ9NUZ1 547 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 SLC25A10Q9UBX3 287 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-215ENST00000478473 GTF2A1LQ9UNN4 478 aa19.28■□□□□ 0.68
C9orf3-215ENST00000478473 MDFIC2A0A1B0GVS7 189 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 ENTPD6O75354 484 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 RPP14O95059 124 aaKnown RBP19.27■□□□□ 0.68
C9orf3-215ENST00000478473 ACTC1P68032 377 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 ACTA1P68133 377 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 IKZF1Q13422 519 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 RUSC1-AS1Q66K80 236 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 C16orf87Q6PH81 154 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 ACP7Q6ZNF0 438 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms