RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 LIMS3P0CW19 117 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 LIMS4P0CW20 117 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 OR3A4PP47883 348 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 SP6Q3SY56 376 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 ZNF260Q3ZCT1 412 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 ABI3BPQ7Z7G0 1075 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 PPM1DO15297 605 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 SLC16A12Q6ZSM3 486 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 OR2I1PQ8NGU4 316 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 HSD17B10Q99714 261 aaKnown RBP16.64■□□□□ 0.25
VARS2-209ENST00000477288 CACFD1Q9UGQ2 172 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 TGOLN2O43493 480 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 FFAR4Q5NUL3 377 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 SPNS2Q8IVW8 549 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 HOXC8P31273 242 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 TCTN1Q2MV58 587 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 HES3Q5TGS1 186 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 DERL3Q96Q80 235 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 KLK11Q9UBX7 282 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 LRP12Q9Y561 859 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 MYO7AQ13402 2215 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 TMEM97Q5BJF2 176 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 ANKRD37Q7Z713 158 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 KLHDC1Q8N7A1 406 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 ZBTB44Q8NCP5 570 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 NXF2Q9GZY0 626 aaKnown RBP16.63■□□□□ 0.25
VARS2-209ENST00000477288 PPIL1Q9Y3C6 166 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 LYZL6O75951 148 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 NGFP01138 241 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 GNG3P63215 75 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 NHLH1Q02575 133 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 NHLH2Q02577 135 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 ZNF788Q6ZQV5 615 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 TCTE3Q8IZS6 198 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 WDR89Q96FK6 387 aaPredicted RBP16.63■□□□□ 0.25
VARS2-209ENST00000477288 PARD6AQ9NPB6 346 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 DOK5Q9P104 306 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 TRBV5-4A0A0C4DH59 114 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 ACER2Q5QJU3 275 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 MAMSTRQ6ZN01 415 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 Q6ZNX1 250 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 MYPOPQ86VE0 399 aaPredicted RBP16.63■□□□□ 0.25
VARS2-209ENST00000477288 RFESDQ8TAC1 157 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 TMPRSS13Q9BYE2 586 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 PSG11Q9UQ72 335 aa16.63■□□□□ 0.25
VARS2-209ENST00000477288 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
VARS2-209ENST00000477288 IGHV3-43A0A0B4J1X8 118 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 MASP2O00187 686 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 IGHV3-43DP0DP04 118 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 TNFAIP6P98066 277 aaPredicted RBP16.62■□□□□ 0.25
VARS2-209ENST00000477288 SSPNQ14714 243 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 PRR7Q8TB68 274 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 FSCN3Q9NQT6 498 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 PNPP00491 289 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 TMEM108Q6UXF1 575 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 MED30Q96HR3 178 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 PCED1AQ9H1Q7 454 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 SLC26A1Q9H2B4 701 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 KCNE3Q9Y6H6 103 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 PRSS44E7EML9 344 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 TOX3O15405 576 aaPredicted RBP16.62■□□□□ 0.25
VARS2-209ENST00000477288 RPP25Q9BUL9 199 aaKnown RBP16.62■□□□□ 0.25
VARS2-209ENST00000477288 TRAPPC4Q9Y296 219 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 POMT1Q9Y6A1 747 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 LAMA4Q16363 1823 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 VWA1Q6PCB0 445 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 OCIAD1Q9NX40 245 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 IGHV5-51A0A0C4DH38 117 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 TEX50A0A1B0GTY4 177 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 FAM157AC9JC47 383 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 ZNF117Q03924 483 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 BTNL3Q6UXE8 466 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 C19orf35Q6ZS72 473 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 TP53I13Q8NBR0 393 aaPredicted RBP16.62■□□□□ 0.25
VARS2-209ENST00000477288 RNF24Q9Y225 148 aa16.62■□□□□ 0.25
VARS2-209ENST00000477288 RNF224P0DH78 156 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 CD200P41217 278 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 EVX1P49640 407 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 A0A1B0GUH1 482 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 KLK8O60259 260 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 FZD6O60353 706 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 CLDN20P56880 219 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 Q8IYB0 196 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 COL22A1Q8NFW1 1626 aaPredicted RBP16.61■□□□□ 0.25
VARS2-209ENST00000477288 A0A1W2PNV4 684 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 IGHV3-13P01766 116 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 IGHV3-7P01780 117 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 OR5AL1P0C617 328 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 OR6S1Q8NH40 331 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 CXorf58Q96LI9 332 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 TAAR3PQ9P1P4 343 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 PHOX2AO14813 284 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 TO15178 435 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 AKR7A2O43488 359 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 NEURL1O76050 574 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 FUT3P21217 361 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 PNLIPRP3Q17RR3 467 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 FNDC7Q5VTL7 733 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 SFTPA2Q8IWL1 248 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 SFTPA1Q8IWL2 248 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms