RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 C10orf35Q96D05 121 aa8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 TMEM80Q96HE8 168 aa8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 TECTBQ96PL2 329 aa8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 JAM3Q9BX67 310 aa8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 C7orf69Q9H7B7 122 aa8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 HHLA2Q9UM44 414 aa8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 POLR3KQ9Y2Y1 108 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 SETD2Q9BYW2 2564 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-213ENST00000461577 FAM230AA0A1W2PPH8 454 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 EFCAB10A6NFE3 127 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 KIAA1324LA8MWY0 1029 aaPredicted RBP8.83□□□□□ -1
TRAPPC12-213ENST00000461577 H0YJX3 145 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 TRAPPC2LH3BP13 241 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 AKR7A2O43488 359 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 ISG15P05161 165 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 RPSAP08865 295 aaKnown RBP8.83□□□□□ -1
TRAPPC12-213ENST00000461577 LIMS3P0CW19 117 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 LIMS4P0CW20 117 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 GLRA1P23415 457 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 HAAOP46952 286 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 ETV1P50549 477 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 AQP4P55087 323 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 CNN3Q15417 329 aaKnown RBP8.83□□□□□ -1
TRAPPC12-213ENST00000461577 WDR25Q64LD2 544 aaPredicted RBP8.83□□□□□ -1
TRAPPC12-213ENST00000461577 BTNL3Q6UXE8 466 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 SLC36A1Q7Z2H8 476 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 PRIMA1Q86XR5 153 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 OR13C3Q8NGS6 347 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 NPRL2Q8WTW4 380 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 NRG4Q8WWG1 115 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 PP6455Q8WZ26 134 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 TFAP2CQ92754 450 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 GGHQ92820 318 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 FGGYQ96C11 551 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 C12orf43Q96C57 262 aaKnown RBP8.83□□□□□ -1
TRAPPC12-213ENST00000461577 ZNF649Q9BS31 505 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 MRI1Q9BV20 369 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 TMPRSS13Q9BYE2 586 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 COMMD4Q9H0A8 199 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 MMP26Q9NRE1 261 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 SNTG1Q9NSN8 517 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 DIMT1Q9UNQ2 313 aaKnown RBP8.83□□□□□ -1
TRAPPC12-213ENST00000461577 POLDIP2Q9Y2S7 368 aa8.83□□□□□ -1
TRAPPC12-213ENST00000461577 CAB39Q9Y376 341 aaPredicted RBP8.83□□□□□ -1
TRAPPC12-213ENST00000461577 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -12e-7■■□□□ 12.9
TRAPPC12-213ENST00000461577 LOC105371242A0A075B767 164 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 TRBV2A0A0J9YWF9 115 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 PQLC2LA1A4F0 135 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 NKX6-3A6NJ46 265 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 TMEM212A6NML5 194 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 OR4C45A6NMZ5 311 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 E9PI62 339 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 J3QT63 122 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 TNFRSF13BO14836 293 aaPredicted RBP8.82□□□□□ -1
TRAPPC12-213ENST00000461577 TMPRSS2O15393 492 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 RHBDL1O75783 438 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 OCM2P0CE71 109 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 OCMP0CE72 109 aaPredicted RBP8.82□□□□□ -1
TRAPPC12-213ENST00000461577 PIPP12273 146 aaPredicted RBP8.82□□□□□ -1
TRAPPC12-213ENST00000461577 GABRA2P47869 451 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 TGM4P49221 684 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 FUT6P51993 359 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 ST3GAL4Q11206 333 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 SCGB2A2Q13296 93 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 UBE2V2Q15819 145 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 KRTAP21-3Q3LHN1 58 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 CD276Q5ZPR3 534 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 ZNF841Q6ZN19 808 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 STX19Q8N4C7 294 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 BPIFB6Q8NFQ5 453 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 OR5AK2Q8NH90 309 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 NANPQ8TBE9 248 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 RAB40AQ8WXH6 277 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 AQP3Q92482 292 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 TMIGD2Q96BF3 282 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 SEH1LQ96EE3 360 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 BORCS8Q96FH0 119 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 CCL13Q99616 98 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 NUDT16L1Q9BRJ7 211 aaKnown RBP8.82□□□□□ -1
TRAPPC12-213ENST00000461577 CHST5Q9GZS9 411 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 WDR13Q9H1Z4 485 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 RASSF4Q9H2L5 321 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 CNOT2Q9NZN8 540 aaKnown RBP8.82□□□□□ -1
TRAPPC12-213ENST00000461577 CTSZQ9UBR2 303 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 METRNQ9UJH8 293 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 INSIG2Q9Y5U4 225 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 WNK2Q9Y3S1 2297 aa8.82□□□□□ -1
TRAPPC12-213ENST00000461577 IGHV2-70DA0A0C4DH43 119 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.81□□□□□ -1
TRAPPC12-213ENST00000461577 NDUFB3O43676 98 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 SYNGR1O43759 233 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 ENSAO43768 121 aaKnown RBP8.81□□□□□ -1
TRAPPC12-213ENST00000461577 XPNPEP2O43895 674 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 AVPP01185 164 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 ATF1P18846 271 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 GTF2A1P52655 376 aaPredicted RBP8.81□□□□□ -1
TRAPPC12-213ENST00000461577 ATP1B3P54709 279 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 OR2G6Q5TZ20 316 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 STUMQ69YW2 141 aa8.81□□□□□ -1
TRAPPC12-213ENST00000461577 RPL22L1Q6P5R6 122 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms