RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CCL2P13500 99 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF32P17041 273 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 PVALBP20472 110 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 CRYGSP22914 178 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 IDH3GP51553 393 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 KRTAP10-9P60411 292 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 UBE2NP61088 152 aaKnown RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 RAB1AP62820 205 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 ELFN2Q5R3F8 820 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 SLC16A14Q7RTX9 510 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 GLB1L2Q8IW92 636 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 C17orf78Q8N4C9 275 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 C12orf45Q8N5I9 185 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 TRMT10AQ8TBZ6 339 aaKnown RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 ORAI1Q96D31 301 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 MUCL1Q96DR8 90 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 PLPPR2Q96GM1 343 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 OR10A4Q9H209 315 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 TRAV20A0A0B4J274 112 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 IGHV1-18A0A0C4DH31 117 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 SNRPGP15A8MWD9 76 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 M0R1B8 84 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 CREBL2O60519 120 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 WNT11O96014 354 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 IFNGP01579 166 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 CD3GP09693 182 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 SLC2A5P22732 501 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 CRABP1P29762 137 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 BSPH1Q075Z2 132 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 KLF9Q13886 244 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 FAM27BQ5VT28 67 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 SFXN4Q6P4A7 337 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 CXXC5Q7LFL8 322 aaKnown RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 LINC00346Q8IVM7 164 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 SPAG16Q8N0X2 631 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 SVBPQ8N300 66 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 CPEB3Q8NE35 698 aaKnown RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 OR6K6Q8NGW6 343 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 AKR7LQ8NHP1 331 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 FAM222BQ8WU58 562 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 NEUROG1Q92886 237 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 ZMYND19Q96E35 227 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 PIK3IP1Q96FE7 263 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 NARS2Q96I59 477 aaKnown RBP8.53□□□□□ -1.04
CCDC171-203ENST00000449575 ARL6Q9H0F7 186 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 PIPOXQ9P0Z9 390 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 LHFPL6Q9Y693 200 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 TMEM82A0PJX8 343 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 HLA-DQA2P01906 255 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 MT-ND4P03905 459 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 MSR1P21757 451 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 HOXC12P31275 282 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 THBS2P35442 1172 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.04
CCDC171-203ENST00000449575 LHFPL3Q86UP9 236 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 ASB13Q8WXK3 278 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 JAM3Q9BX67 310 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 ABRACLQ9P1F3 81 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 ASH2LQ9UBL3 628 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 AMDHD2Q9Y303 409 aa8.52□□□□□ -1.04
CCDC171-203ENST00000449575 ANKRD17O75179 2603 aaKnown RBP8.52□□□□□ -1.05
CCDC171-203ENST00000449575 A6NNC1 897 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 SULT1C2O00338 296 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 RER1O15258 196 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 SGCEO43556 437 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 SERPINA3P01011 423 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 IGKV3-15P01624 115 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 RLN2P04090 185 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 IL5P05113 134 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 CECR9P0C854 216 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 UBBP0CG47 229 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 UBCP0CG48 685 aaKnown RBP8.52□□□□□ -1.05
CCDC171-203ENST00000449575 NR2C1P13056 603 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 ZNF14P17017 642 aaPredicted RBP8.52□□□□□ -1.05
CCDC171-203ENST00000449575 SLC25A1P53007 311 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 HCCSP53701 268 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 RPS27AP62979 156 aaKnown RBP8.52□□□□□ -1.05
CCDC171-203ENST00000449575 UBA52P62987 128 aaKnown RBP8.52□□□□□ -1.05
CCDC171-203ENST00000449575 PSG4Q00888 419 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 GLO1Q04760 184 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 PAQR4Q8N4S7 273 aaPredicted RBP8.52□□□□□ -1.05
CCDC171-203ENST00000449575 SFT2D1Q8WV19 159 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 NRGNQ92686 78 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 CMTM3Q96MX0 182 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 NKIRAS2Q9NYR9 191 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 TAS2R3Q9NYW6 316 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 FBXL3Q9UKT7 428 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 EXOGQ9Y2C4 368 aaKnown RBP8.52□□□□□ -1.05
CCDC171-203ENST00000449575 ARFGEF3Q5TH69 2177 aa8.52□□□□□ -1.05
CCDC171-203ENST00000449575 FAM221AA4D161 298 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 CTAG2O75638 210 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 ATG12O94817 140 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 FARS2O95363 451 aaKnown RBP8.51□□□□□ -1.05
CCDC171-203ENST00000449575 IGLV1-44P01699 117 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 S100PP25815 95 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 CCR9P51686 369 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 CDH11P55287 796 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 AADACL4Q5VUY2 407 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 ADAM5Q6NVV9 412 aa8.51□□□□□ -1.05
CCDC171-203ENST00000449575 ZNF774Q6NX45 483 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms