RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 GDPGP1Q6ZNW5 385 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 LHFPL2Q6ZUX7 228 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 SCCPDHQ8NBX0 429 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 ZNF420Q8TAQ5 688 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 NEU4Q8WWR8 484 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 PERPQ96FX8 193 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 KCTD7Q96MP8 289 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 GFI1Q99684 422 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 SLITRK2Q9H156 845 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 OR51I2Q9H344 312 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 SNTG1Q9NSN8 517 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 DCAF16Q9NXF7 216 aa15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 AK6Q9Y3D8 172 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-203ENST00000447216 ASH1LQ9NR48 2969 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 TRAV1-2A0A0B4J238 106 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 LRP5LA4QPB2 252 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 MAGEB3O15480 346 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 GABARAPO95166 117 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 IGHV4-39P01824 125 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 CLEC2LP0C7M8 214 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 HAAOP46952 286 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 PTH2RP49190 550 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 POU3F4P49335 361 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 HOXA4Q00056 320 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 CTF1Q16619 201 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 HAGHLQ6PII5 290 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 CALHM1Q8IU99 346 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 C11orf53Q8IXP5 236 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 JAGN1Q8N5M9 183 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 CELF2-AS1Q8N7Q2 184 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 OR5D18Q8NGL1 313 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 YIPF5Q969M3 257 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 GPER1Q99527 375 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 NEK6Q9HC98 313 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 GCM1Q9NP62 436 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 ZNF701Q9NV72 531 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 C1orf123Q9NWV4 160 aa15.2■□□□□ 0.02
TRAPPC4-203ENST00000447216 NAV2Q8IVL1 2488 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 C3orf80F5H4A9 247 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 CDIPTO14735 213 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 SPRY1O43609 319 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 SYNGR1O43759 233 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 CDRT1O95170 752 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 PTBP3O95758 552 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 ALDOBP05062 364 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 DAOP14920 347 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 TNFRSF1AP19438 455 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 COL8A2P25067 703 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 SDC2P34741 201 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 GATA4P43694 442 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 EFNA4P52798 201 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 ATP5J2P56134 94 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 OR10A3P58181 314 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 MXD1Q05195 221 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 KISS1Q15726 138 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 FAM76BQ5HYJ3 339 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 ZNF573Q86YE8 665 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 BATF2Q8N1L9 274 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 FN3KRPQ9HA64 309 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 PPP1R3CQ9UQK1 317 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 CEPT1Q9Y6K0 416 aa15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 FLNBO75369 2602 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-203ENST00000447216 IGHV1-69-2A0A0G2JMI3 117 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 hCG_1807616A0A1W2PRN6 198 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 J3QT63 122 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 RHBDL1O75783 438 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 F12P00748 615 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 ZNF93P35789 620 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 OR3A4PP47883 348 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 MTNR1BP49286 362 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 CAV3P56539 151 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 CDH24Q86UP0 819 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 AQP3Q92482 292 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 ZNF488Q96MN9 340 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 TLNRD1Q9H1K6 362 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 METTL17Q9H7H0 456 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 EDARQ9UNE0 448 aa15.18■□□□□ 0.02
TRAPPC4-203ENST00000447216 PDZD2O15018 2839 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 MEGF11A6BM72 1044 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 DPPA5A6NC42 116 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 CCDC160A6NGH7 325 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 TRIM64BA6NI03 449 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 PDCD5O14737 125 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 ANGPTL7O43827 346 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 SSX4O60224 188 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 CYB5R3P00387 301 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 RAB3BP20337 219 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 SERPINB10P48595 397 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 ZP1P60852 638 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 GMFBP60983 142 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 CARTPTQ16568 116 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 DEFB113Q30KQ7 82 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 WDR82Q6UXN9 313 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 SLC25A26Q70HW3 274 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 NR2C2APQ86WQ0 139 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 LYPD6Q86Y78 171 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 NKAIN3Q8N8D7 197 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 BOLLQ8N9W6 283 aaKnown RBP15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 CCL17Q92583 94 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 RDH5Q92781 318 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms