RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CYCSP99999 105 aaKnown RBP11.94□□□□□ -0.5
THBS3-202ENST00000428962 PSG4Q00888 419 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 SURF2Q15527 256 aaPredicted RBP11.94□□□□□ -0.5
THBS3-202ENST00000428962 STK11Q15831 433 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 KCNRGQ8N5I3 272 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 THAP6Q8TBB0 222 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 TECTBQ96PL2 329 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 ZNF703Q9H7S9 590 aaPredicted RBP11.94□□□□□ -0.5
THBS3-202ENST00000428962 FN3KRPQ9HA64 309 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 RDH8Q9NYR8 311 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 SHPKQ9UHJ6 478 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 ZNF230Q9UIE0 474 aaPredicted RBP11.94□□□□□ -0.5
THBS3-202ENST00000428962 ATPIF1Q9UII2 106 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 TNFSF18Q9UNG2 199 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 GPR132Q9UNW8 380 aa11.94□□□□□ -0.5
THBS3-202ENST00000428962 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PCSK5Q92824 1860 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 IGKV3D-15A0A087WSY6 115 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 XRCC2O43543 280 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 CD59P13987 128 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 ACKR3P25106 362 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 RSU1Q15404 277 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 CHRFAM7AQ494W8 412 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 NSUN5P2Q63ZY6 315 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 SPINK14Q6IE38 97 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 KCTD9Q7L273 389 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PEG10Q86TG7 708 aaKnown RBP11.93□□□□□ -0.5
THBS3-202ENST00000428962 LHFPL1Q86WI0 220 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 OR2AE1Q8NHA4 323 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 COQ8AQ8NI60 647 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PPP1R1CQ8WVI7 109 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PCNPQ8WW12 178 aaKnown RBP11.93□□□□□ -0.5
THBS3-202ENST00000428962 BORCS8Q96FH0 119 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 Q96M66 194 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 IP6K3Q96PC2 410 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 CDC6Q99741 560 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 ST6GALNAC5Q9BVH7 336 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 LINC00470Q9BZP3 86 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 WNT5BQ9H1J7 359 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PPA2Q9H2U2 334 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 EHFQ9NZC4 300 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 NOSIPQ9Y314 301 aaKnown RBP11.93□□□□□ -0.5
THBS3-202ENST00000428962 VPS13AQ96RL7 3174 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 FAM186AA6NE01 2351 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 DBX1A6NMT0 343 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 MRPL33O75394 65 aaKnown RBP11.93□□□□□ -0.5
THBS3-202ENST00000428962 NEURL1O76050 574 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 SYNGR4O95473 234 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 SFT2D2O95562 160 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 SERPINA5P05154 406 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 RBP2P50120 134 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 NPY4RP50391 375 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 HGFACQ04756 655 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 DMRTC1Q5HYR2 192 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
THBS3-202ENST00000428962 OR5AP2Q8NGF4 316 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 LRRC20Q8TCA0 184 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 RBPMSQ93062 196 aaKnown RBP11.93□□□□□ -0.5
THBS3-202ENST00000428962 ZNF845Q96IR2 970 aaPredicted RBP11.93□□□□□ -0.5
THBS3-202ENST00000428962 ARPC5LQ9BPX5 153 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PLEKHJ1Q9NW61 149 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 PARPBPQ9NWS1 579 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 EDARQ9UNE0 448 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 OSGIN2Q9Y236 505 aa11.93□□□□□ -0.5
THBS3-202ENST00000428962 FAM230AA0A1W2PPH8 454 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 C5orf51A6NDU8 294 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 TERTO14746 1132 aaKnown RBP11.92□□□□□ -0.5
THBS3-202ENST00000428962 BCL2L11O43521 198 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 CRYZL1O95825 349 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 MT-CO3P00414 261 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 F10P00742 488 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 NRASP01111 189 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 NMBP08949 121 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 GABRR1P24046 479 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 ITGA3P26006 1051 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 AIMP2Q13155 320 aaKnown RBP11.92□□□□□ -0.5
THBS3-202ENST00000428962 LRRC37A5PQ49AS3 106 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 DCAF10Q5QP82 559 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 ACOT7LQ6ZUV0 252 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 DTX1Q86Y01 620 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 OR13G1Q8NGZ3 307 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 SEC22AQ96IW7 307 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 NMES1Q9C002 83 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 RAB18Q9NP72 206 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 PCDHB16Q9NRJ7 776 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 ZNF701Q9NV72 531 aaPredicted RBP11.92□□□□□ -0.5
THBS3-202ENST00000428962 HSF4Q9ULV5 492 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 SLC7A11Q9UPY5 501 aa11.92□□□□□ -0.5
THBS3-202ENST00000428962 GPR179Q6PRD1 2367 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 hCG_38984A0A1B0GV85 526 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
THBS3-202ENST00000428962 SPDEFO95238 335 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 HTR3BO95264 441 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms