RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CEBPEQ15744 281 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 PLPP5Q8NEB5 264 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 OR51F2Q8NH61 342 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 LRFN5Q96NI6 719 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 PRRG4Q9BZD6 226 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 FAM212BQ9NTI7 297 aaPredicted RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 KCNE5Q9UJ90 142 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 CD8AP01732 235 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 SLC6A9P48067 706 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 SSR4P51571 173 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 SPOCK1Q08629 439 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 SGCBQ16585 318 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 GLYATL3Q5SZD4 288 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 FHL5Q5TD97 284 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 DMRTA1Q5VZB9 504 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 OR10AC1Q8NH08 325 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 KISS1RQ969F8 398 aaPredicted RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 OR11A1Q9GZK7 315 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 LUZP4Q9P127 313 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 SLC33A1O00400 549 aaPredicted RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 ZIC2O95409 532 aaPredicted RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 DDAH2O95865 285 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 NANOS3P60323 173 aaKnown RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 GABREP78334 506 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 C17orf67Q0P5P2 114 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 MRGPREQ86SM8 312 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 C17orf78Q8N4C9 275 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 SAT2Q96F10 170 aaPredicted RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 RALGAPA1Q6GYQ0 2036 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 COL6A6A6NMZ7 2263 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 C17orf51A8MQB3 221 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 H7C1C5 153 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 BHLHE40O14503 412 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 EREGO14944 169 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 OGG1O15527 345 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 SCGNO76038 276 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 LCN6P62502 163 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 RAB32Q13637 225 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 UBE2V2Q15819 145 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 ALG10Q5BKT4 473 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 CARD17Q5XLA6 110 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 OR10G3Q8NGC4 313 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 OR10AD1Q8NGE0 317 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 ZNF721Q8TF20 911 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 RASD2Q96D21 266 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 RRNAD1Q96FB5 475 aaKnown RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 OR5B2Q96R09 309 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 OR5AC2Q9NZP5 309 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 VSIG4Q9Y279 399 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 TEX13DA0A0J9YY54 714 aaPredicted RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 SHISA8B8ZZ34 492 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 C1QL1O75973 258 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 GVQW1Q8N7I0 195 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 ADAD2Q8NCV1 583 aaKnown RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 TIMP4Q99727 224 aa14.16□□□□□ -0.14
PKP4-205ENST00000426248 DNAJB12Q9NXW2 375 aaKnown RBP14.16□□□□□ -0.14
PKP4-205ENST00000426248 CRABP1P29762 137 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 OR3A2P47893 321 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 VAMP2P63027 116 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 HAGHQ16775 308 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 CLEC12BQ2HXU8 276 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 LBHQ53QV2 105 aaPredicted RBP14.15□□□□□ -0.14
PKP4-205ENST00000426248 AWAT2Q6E213 333 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 ANKRD16Q6P6B7 361 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 GFI1Q99684 422 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 C2orf88Q9BSF0 95 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 SHANK1Q9Y566 2161 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 A6NNC1 897 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 M0R143 59 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 HSPA12AO43301 675 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 TCF21O43680 179 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 RENP00797 406 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 S1PR1P21453 382 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 RPUSD3Q6P087 351 aaKnown RBP14.15□□□□□ -0.14
PKP4-205ENST00000426248 SYS1Q8N2H4 156 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 OR14L1PQ8NHC6 308 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 ZNF426Q9BUY5 554 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 MYOTQ9UBF9 498 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 TNFSF12O43508 249 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 ITGB2P05107 769 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 HRH1P35367 487 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 EXT1Q16394 746 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 OR51A4Q8NGJ6 313 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 OR2Y1Q8NGV0 311 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 TWSG1Q9GZX9 223 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 CHRNA10Q9GZZ6 450 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 P4HTMQ9NXG6 502 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 TP53TG5Q9Y2B4 290 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 HIF3AQ9Y2N7 669 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 DOCK10Q96BY6 2186 aa14.15□□□□□ -0.14
PKP4-205ENST00000426248 NPIPA5E9PKD4 350 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 PPIHO43447 177 aaKnown RBP14.14□□□□□ -0.15
PKP4-205ENST00000426248 SOD3P08294 240 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 IDH3GP51553 393 aaPredicted RBP14.14□□□□□ -0.15
PKP4-205ENST00000426248 SNU13P55769 128 aaKnown RBP14.14□□□□□ -0.15
PKP4-205ENST00000426248 CT55Q8WUE5 264 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 NPIPA1Q9UND3 350 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 TMED7-TICAM2A0A0A6YYA0 188 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 LOC100289279A0A1B0GTE1 492 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms