RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TRAV8-6A0A0B4J262 113 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 A0A1W2PQ67 120 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 TMEM72A0PK05 275 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 CENPBD1B2RD01 187 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 J3QT63 122 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 UPK1AO00322 258 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 ZNF593O00488 134 aaPredicted RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 OR7C2O60412 319 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 ZMPSTE24O75844 475 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 CDRT1O95170 752 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 S100A9P06702 114 aaKnown RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 HSPD1P10809 573 aaKnown RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 ATP5J2P56134 94 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 CMC4P56277 68 aaPredicted RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 TRDNQ13061 729 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 PIGHQ14442 188 aaPredicted RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 TAL2Q16559 108 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 SP6Q3SY56 376 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 LUZP6Q538Z0 58 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 DUPD1Q68J44 220 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 ORMDL3Q8N138 153 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 RNF182Q8N6D2 247 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 OR4M2Q8NGB6 313 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 C19orf60Q96EN9 201 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 RNF170Q96K19 258 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 SPACA5Q96QH8 159 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 C20orf144Q9BQM9 153 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 ZNF2Q9BSG1 426 aaPredicted RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 ULBP2Q9BZM5 246 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 FARSAQ9Y285 508 aaKnown RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 PPIL1Q9Y3C6 166 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 V9GYY9 64 aa1.48□□□□□ -2.17
CD47-203ENST00000398258 NPHP4O75161 1426 aaPredicted RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 BRCA1P38398 1863 aaKnown RBP1.48□□□□□ -2.17
CD47-203ENST00000398258 COL1A2P08123 1366 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 SCN1AP35498 2009 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 IGKV1-6A0A0C4DH72 117 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 BTNL10A8MVZ5 291 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 FAM25EA8MYX2 175 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 C16orf90A8MZG2 172 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 M0R1B8 84 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 SCO1O75880 301 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 PTTG1O95997 202 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 IGKV1-39P01597 117 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 IGKV1D-39P04432 117 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 RPN2P04844 631 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 RHOCP08134 193 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 PRKACBP22694 351 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 PAX6P26367 422 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 HTR2CP28335 458 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 MPV17P39210 176 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 GALR1P47211 349 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 TAS2R43P59537 309 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 KRTAP10-10P60014 251 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 PPP1CAP62136 330 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 XIAPP98170 497 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 FUT5Q11128 374 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 DYNC1I2Q13409 638 aaKnown RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 MAD2L1BPQ15013 274 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 SHHQ15465 462 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 C18orf21Q32NC0 220 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 HHATQ5VTY9 493 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 AADACL4Q5VUY2 407 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 FAM104BQ5XKR9 115 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 PRSS54Q6PEW0 395 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 DEGS2Q6QHC5 323 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 C16orf47Q6ZP98 133 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 FAM19A1Q7Z5A9 133 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 LYPD1Q8N2G4 141 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 MIR7-3HGQ8N6C7 128 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 LINC00337Q8N6G1 96 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 CYB561A3Q8NBI2 242 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 SLC26A10Q8NG04 563 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 MSANTD3Q96H12 275 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 ZFP3Q96NJ6 502 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 CDX2Q99626 313 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 CTRCQ99895 268 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 COA1Q9GZY4 146 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 PORCNQ9H237 461 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 PRORYQ9H606 182 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 XKR8Q9H6D3 395 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 WDR55Q9H6Y2 383 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 LINC00574Q9H8X3 128 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 CSNK1G1Q9HCP0 422 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 C6orf50Q9HD87 102 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 FBXO6Q9NRD1 293 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 CA10Q9NS85 328 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 VAPAQ9P0L0 249 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 AP3M1Q9Y2T2 418 aa1.47□□□□□ -2.17
CD47-203ENST00000398258 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
CD47-203ENST00000398258 FAM240AA0A1B0GVK7 77 aa1.46□□□□□ -2.18
CD47-203ENST00000398258 ISPDA4D126 451 aa1.46□□□□□ -2.18
CD47-203ENST00000398258 A8MWL6 223 aa1.46□□□□□ -2.18
CD47-203ENST00000398258 SEC14L6B5MCN3 397 aa1.46□□□□□ -2.18
CD47-203ENST00000398258 LGALS9O00182 355 aa1.46□□□□□ -2.18
CD47-203ENST00000398258 IGKV1D-16P01601 117 aa1.46□□□□□ -2.18
CD47-203ENST00000398258 CD8AP01732 235 aa1.46□□□□□ -2.18
CD47-203ENST00000398258 MAS1P04201 325 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms