RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 SLC26A10Q8NG04 563 aa14.33□□□□□ -0.12
PTPRN2-201ENST00000389413 KNTC1P50748 2209 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 TRBV5-5A0A0J9YX44 114 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 ELLP55199 621 aaPredicted RBP14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 LSRQ86X29 649 aaPredicted RBP14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 OR2AE1Q8NHA4 323 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 AKR1E2Q96JD6 320 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 TMEM68Q96MH6 324 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 FAAP24Q9BTP7 215 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 TOX3O15405 576 aaPredicted RBP14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 KLF4O43474 513 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 ADAP1O75689 374 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 HLA-HP01893 362 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 NFYBP25208 207 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 CSF2RBP32927 897 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 EXTL1Q92935 676 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 CTHRC1Q96CG8 243 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 GNG13Q9P2W3 67 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 NGFRP08138 427 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF721Q8TF20 911 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 RAB39BQ96DA2 213 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 RNF150Q9ULK6 438 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 PPP1R3CQ9UQK1 317 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 PRELID3BQ9Y3B1 194 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 OR5H15A6NDH6 313 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 C4orf47A7E2U8 309 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 MBTPS2O43462 519 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 FCARP24071 287 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF239Q16600 458 aaKnown RBP14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF561Q8N587 486 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 SLC25A38Q96DW6 304 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 PIK3IP1Q96FE7 263 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 BTF3L4Q96K17 158 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 HIPK2Q9H2X6 1198 aa14.32□□□□□ -0.12
PTPRN2-201ENST00000389413 SHISA3A0PJX4 238 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF732B4DXR9 585 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 GPR31O00270 319 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 SOCS1O15524 211 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 DEFA6Q01524 100 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 SPANXN5Q5MJ07 72 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 MRPL41Q8IXM3 137 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 HEYLQ9NQ87 328 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 KLF13Q9Y2Y9 288 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 TMED3Q9Y3Q3 217 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 LOXL2Q9Y4K0 774 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 SH2D1BO14796 132 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 OR2B8PP59922 312 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 C1orf87Q8N0U7 546 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 CRIPAKQ8N1N5 446 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 LIN37Q96GY3 246 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 DUSP13Q9UII6 198 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 IGF2P01344 180 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 AGFG1P52594 562 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 LCN15Q6UWW0 184 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 OR4D10Q8NGI6 311 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 OR1J1Q8NGS3 322 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 SCARF2Q96GP6 870 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 NMES1Q9C002 83 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 SERTAD4Q9NUC0 356 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 ANKRD36A6QL64 1941 aa14.31□□□□□ -0.12
PTPRN2-201ENST00000389413 SIRPB1O00241 398 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 PIN1P1O15428 100 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 THY1P04216 161 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 VSIG10L2P0DP72 767 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 VSIG8P0DPA2 414 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 HLA-DOBP13765 273 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 RAC1P63000 192 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 INSM1Q01101 510 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 SLC10A1Q14973 349 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 OR8G1Q15617 311 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 WIPI1Q5MNZ9 446 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF774Q6NX45 483 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 CLEC18BQ6UXF7 455 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 UNQ9370/PRO34162Q6UXP9 181 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 H2BFWTQ7Z2G1 175 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 THNSL2Q86YJ6 484 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 PTX4Q96A99 478 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 APOBEC3DQ96AK3 386 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 MENTQ9BUN1 341 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 ARV1Q9H2C2 271 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 RP1L1Q8IWN7 2480 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 DXOO77932 396 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 LSM6P62312 80 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 SURF2Q15527 256 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 GGNBP1Q5YKI7 109 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 C20orf196Q8IYI0 205 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 TMEM123Q8N131 208 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 UHRF2Q96PU4 802 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 C1QTNF6Q9BXI9 259 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 C19orf12Q9NSK7 152 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 CACNA1IQ9P0X4 2223 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 CEP290O15078 2479 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 A0A1W2PPC1 479 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 PRSS44E7EML9 344 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 RAB27BO00194 218 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 UPK3AO75631 287 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 S100A8P05109 93 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 SELEP16581 610 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 HOXA1P49639 335 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 GUK1Q16774 197 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms