RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 A0A1B0GTI1 187 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 A0A1B0GVI7 797 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 TRIM77I1YAP6 450 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 CD2P06729 351 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 ZNF12P17014 697 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 CFPP27918 469 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 TGFBR1P36897 503 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 DCAF12L2Q5VW00 463 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 DOK3Q7L591 496 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 NAA40Q86UY6 237 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 RDH10Q8IZV5 341 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 BPIFB2Q8N4F0 458 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 OR10AC1Q8NH08 325 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 JMJD8Q96S16 334 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 EGLN1Q9GZT9 426 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 NKIRAS2Q9NYR9 191 aa11.62□□□□□ -0.55
PRPF18-202ENST00000378572 P2RY10O00398 339 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 SYT7O43581 403 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 LCATP04180 440 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 ZNF182P17025 639 aaPredicted RBP11.61□□□□□ -0.55
PRPF18-202ENST00000378572 ADRA2CP18825 462 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 MYL9P24844 172 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 ODF4Q2M2E3 257 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 HSD17B12Q53GQ0 312 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 PEG10Q86TG7 708 aaKnown RBP11.61□□□□□ -0.55
PRPF18-202ENST00000378572 TPRA1Q86W33 373 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 OR51A4Q8NGJ6 313 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 SLC25A40Q8TBP6 338 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 ZFAND2BQ8WV99 257 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 TSEN15Q8WW01 171 aaKnown RBP11.61□□□□□ -0.55
PRPF18-202ENST00000378572 TMEM106AQ96A25 262 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 APOBEC3DQ96AK3 386 aaPredicted RBP11.61□□□□□ -0.55
PRPF18-202ENST00000378572 DCUN1D5Q9BTE7 237 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 PPIL3Q9H2H8 161 aaKnown RBP11.61□□□□□ -0.55
PRPF18-202ENST00000378572 NOX4Q9NPH5 578 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 GPR84Q9NQS5 396 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 TBCCD1Q9NVR7 557 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 CCDC59Q9P031 241 aaKnown RBP11.61□□□□□ -0.55
PRPF18-202ENST00000378572 DHDHQ9UQ10 334 aa11.61□□□□□ -0.55
PRPF18-202ENST00000378572 DHRS7CA6NNS2 312 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 PIN1P1O15428 100 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 XRCC2O43543 280 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 CDRT1O95170 752 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 IGHV1-46P01743 117 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 IGHV3-13P01766 116 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 CALRP27797 417 aaKnown RBP11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SDC2P34741 201 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 MPV17P39210 176 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SNAI3Q3KNW1 292 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 RFPL4BQ6ZWI9 263 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 ZNF101Q8IZC7 436 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 OR51E1Q8TCB6 317 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SPSB4Q96A44 273 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SLC6A7Q99884 636 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SUCNR1Q9BXA5 334 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 OR2J1Q9GZK6 312 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 TBX1O43435 398 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 TIMM8AO60220 97 aaPredicted RBP11.6□□□□□ -0.55
PRPF18-202ENST00000378572 MTRF1O75570 445 aaKnown RBP11.6□□□□□ -0.55
PRPF18-202ENST00000378572 IGHV2-5P01817 119 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 FSTP19883 344 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 ANOS1P23352 680 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 CFL1P23528 166 aaKnown RBP11.6□□□□□ -0.55
PRPF18-202ENST00000378572 WNT5AP41221 380 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SOX2P48431 317 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 LCN2P80188 198 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 DGUOKQ16854 277 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 FAM209AQ5JX71 171 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 FAM27D1Q5T7N8 215 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 PARP16Q8N5Y8 322 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 OR13C3Q8NGS6 347 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SGK3Q96BR1 496 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 C10orf35Q96D05 121 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 OPA3Q9H6K4 179 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SNTG1Q9NSN8 517 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 FOXJ3Q9UPW0 622 aa11.6□□□□□ -0.55
PRPF18-202ENST00000378572 SHISA3A0PJX4 238 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 C5orf63A6NC05 138 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 ZSCAN5BA6NJL1 495 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 DHRS3O75911 302 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 SRMP19623 302 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 RPS19P39019 145 aaKnown RBP11.59□□□□□ -0.55
PRPF18-202ENST00000378572 HILS1P60008 231 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 PPP1CBP62140 327 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 C1QL2Q7Z5L3 287 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 OR14K1Q8NGZ2 314 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 SLC25A46Q96AG3 418 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 LYZL4Q96KX0 146 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 SLITRK2Q9H156 845 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 C7orf69Q9H7B7 122 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 CYSLTR2Q9NS75 346 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 N6AMT1Q9Y5N5 214 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 A3GALT2U3KPV4 340 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 V9GYS6 101 aa11.59□□□□□ -0.55
PRPF18-202ENST00000378572 J3QLI3 93 aa11.58□□□□□ -0.56
PRPF18-202ENST00000378572 AVPP01185 164 aa11.58□□□□□ -0.56
PRPF18-202ENST00000378572 SOX6P35712 828 aa11.58□□□□□ -0.56
PRPF18-202ENST00000378572 GLYATL3Q5SZD4 288 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms