RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 GNB4Q9HAV0 340 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.53
DFFA-202ENST00000377038 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 NGFP01138 241 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 MMP15P51511 669 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 CDCP2Q5VXM1 449 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 GPX8Q8TED1 209 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 OSGIN2Q9Y236 505 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 PCM1Q15154 2024 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 PCMT1P22061 227 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 NME2P22392 152 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 ZNF266Q14584 549 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 KHDC1LQ5JSQ8 128 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 GLCCI1Q86VQ1 547 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 SUMF2Q8NBJ7 301 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 CXXC4Q9H2H0 198 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 AKIP1Q9NQ31 210 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 SERTAD4Q9NUC0 356 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 FRRS1LQ9P0K9 344 aa11.77□□□□□ -0.53
DFFA-202ENST00000377038 ZPLD1Q8TCW7 415 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 ZNF230Q9UIE0 474 aaPredicted RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 CDX4O14627 284 aaPredicted RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 ZNF14P17017 642 aaPredicted RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 CHATP28329 748 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 DMKNQ6E0U4 476 aaPredicted RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 Q6ZNX1 250 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 HPSE2Q8WWQ2 592 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 DLL4Q9NR61 685 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 A0A0A6YYJ9 748 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 GDF9O60383 454 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 PEA15Q15121 130 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 FHL5Q5TD97 284 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 FAAP24Q9BTP7 215 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 CYSLTR2Q9NS75 346 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 PTP4A3O75365 173 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 OR4E1P0C645 316 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.533e-8■■■■□ 21.2
DFFA-202ENST00000377038 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 TMEM229BQ8NBD8 167 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 OR10AD1Q8NGE0 317 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 TINAGL1Q9GZM7 467 aaPredicted RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 MPC1Q9Y5U8 109 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 ZNF354AO60765 605 aaPredicted RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 C6orf201Q7Z4U5 140 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 OR6S1Q8NH40 331 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 RTN4IP1Q8WWV3 396 aaPredicted RBP11.76□□□□□ -0.53
DFFA-202ENST00000377038 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 SLC17A5Q9NRA2 495 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 OR5V1Q9UGF6 321 aa11.76□□□□□ -0.53
DFFA-202ENST00000377038 TUBAL3A6NHL2 446 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 ASAH2BP0C7U1 165 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 HIST1H1DP16402 221 aaKnown RBP11.75□□□□□ -0.53
DFFA-202ENST00000377038 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
DFFA-202ENST00000377038 ZNF528Q3MIS6 628 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 OR5B21A6NL26 309 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 UPK3AO75631 287 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 IGHA1P01876 353 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 TSPO2Q5TGU0 170 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 MFSD4AQ8N468 514 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 SLIRPQ9GZT3 109 aaKnown RBP11.75□□□□□ -0.53
DFFA-202ENST00000377038 RAB1BQ9H0U4 201 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 LGALS8O00214 317 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 AKR7A2O43488 359 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 CTHRC1Q96CG8 243 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 DDOQ99489 341 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 CHRNA10Q9GZZ6 450 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 CSAG2Q9Y5P2 127 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 PCP4L1A6NKN8 68 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 A8MXE2 369 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 C16orf97H3BN30 126 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 SLC26A10Q8NG04 563 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 OR13C8Q8NGS7 320 aa11.75□□□□□ -0.53
DFFA-202ENST00000377038 ANKRD33BA6NCL7 494 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 GABRB1P18505 474 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 S100A11P31949 105 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 CCDC190Q86UF4 302 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 CMTM3Q96MX0 182 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 GCM2O75603 506 aaPredicted RBP11.74□□□□□ -0.53
DFFA-202ENST00000377038 IGLV3-21P80748 117 aaPredicted RBP11.74□□□□□ -0.53
DFFA-202ENST00000377038 TLE4Q04727 773 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 ZNF816Q0VGE8 651 aaPredicted RBP11.74□□□□□ -0.53
DFFA-202ENST00000377038 OXA1LQ15070 435 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 CHST6Q9GZX3 395 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 TREM2Q9NZC2 230 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 SSSCA1O60232 199 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 LRP3O75074 770 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 LINC00271P0C7V0 271 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 GNG10P50151 68 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 KRTCAP3Q53RY4 240 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 SPANXN5Q5MJ07 72 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 ZNF529Q6P280 563 aa11.74□□□□□ -0.53
DFFA-202ENST00000377038 MDP1Q86V88 176 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms