RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 C1SP09871 688 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SCGB1A1P11684 91 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 HMGN2P46Q86SG4 172 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 OR8B4Q96RC9 309 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TAAR3PQ9P1P4 343 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ST3GAL6Q9Y274 331 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 LRP5O75197 1615 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 M0QZ24 198 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 P01737 135 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 LIPFP07098 398 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CDX1P47902 265 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SLC6A12P48065 614 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 EMP3P54852 163 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 DSC1Q08554 894 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SHBQ15464 509 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 COX20Q5RI15 118 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 OR51E1Q8TCB6 317 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 P4HTMQ9NXG6 502 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ZDHHC8Q9ULC8 765 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 PPP1R3CQ9UQK1 317 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 FOCADQ5VW36 1801 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 H0YIG0 161 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 H3BMH7 237 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 H3BQ15 152 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 LANCL1O43813 399 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 GJB5O95377 273 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CA2P00918 260 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 IGHA1P01876 353 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 IGHA2P01877 340 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CD22P20273 847 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SERF2P84101 59 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SSX8Q7RTT4 187 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM37Q8WXS4 190 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF355PQ9NSJ1 428 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 PRSS21Q9Y6M0 314 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 LGALS4P56470 323 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM176BQ3YBM2 270 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 IER5LQ5T953 404 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 NHLRC1Q6VVB1 395 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 PIANPQ8IYJ0 282 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 OR10G3Q8NGC4 313 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 OR10G8Q8NGN5 311 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 VSTM2AQ8TAG5 236 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 GPR61Q9BZJ8 451 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 P2RY12Q9H244 342 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SEBOXQ9HB31 216 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 BCORQ6W2J9 1755 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM272A0A1B0GTI8 110 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ENSAO43768 121 aaKnown RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 HSPB1P04792 205 aaKnown RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 IGFBP1P08833 259 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ATF1P18846 271 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 MMP16P51512 607 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 DPTQ07507 201 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 PPP1R1AQ13522 171 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 MRPL13Q9BYD1 178 aaKnown RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 HES4Q9HCC6 221 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ANXA10Q9UJ72 324 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TRGV10A0A0A0MS01 117 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 RER1O15258 196 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 EIF3IQ13347 325 aaKnown RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 RUNX3Q13761 415 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TNFSF18Q9UNG2 199 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 LMX1BO60663 402 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 MPDU1O75352 247 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 BCL2P10415 239 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 FUT3P21217 361 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 PNLIPRP2P54317 469 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 HOXC5Q00444 222 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CLN3Q13286 438 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 FAM78BQ5VT40 261 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 PRSS45Q7RTY3 260 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 NLGN4XQ8N0W4 816 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CD207Q9UJ71 328 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 COA3Q9Y2R0 106 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SEMG1P04279 462 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF385BQ569K4 471 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SIRT6Q8N6T7 355 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 OR10G4Q8NGN3 311 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 OR10G9Q8NGN4 311 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 OR10G7Q8NGN6 311 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 C1QTNF6Q9BXI9 259 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF385DQ9H6B1 395 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CROCCQ5TZA2 2017 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM33P57088 247 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 JAG1P78504 1218 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TWIST1Q15672 202 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CD226Q15762 336 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 C10orf126Q8N4M7 172 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 TSACCQ96A04 125 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 DDA1Q9BW61 102 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 PRO1933Q9H354 126 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 CGGBP1Q9UFW8 167 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF346Q9UL40 294 aaKnown RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 A0A0A6YYC8 382 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 A0A1B0GU03 582 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 I3L1I5 382 aaPredicted RBP4.97□□□□□ -1.61
PTPRB-202ENST00000334414 NEURL1O76050 574 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SLC25A5P05141 298 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms