RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GLT8D1Q68CQ7 371 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 AWAT2Q6E213 333 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 OR10K2Q6IF99 312 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 CRIP3Q6Q6R5 217 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 C1QL2Q7Z5L3 287 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 DYNC2LI1Q8TCX1 351 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 TNFAIP8L1Q8WVP5 186 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 ITLN1Q8WWA0 313 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 MARVELD3Q96A59 401 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 MICU1Q9BPX6 476 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 RTL8AQ9BWD3 113 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 CACNG6Q9BXT2 260 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 FAIMQ9NVQ4 179 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 CHD3Q12873 2000 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 C17orf100A8MU93 164 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 PDCD5O14737 125 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SYNGR1O43759 233 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF205O95201 554 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 DANCRP0C864 163 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 TMEM225BP0DP42 221 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SNRPBP14678 240 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SWI5Q1ZZU3 235 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 AGAP6Q5VW22 663 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SLC25A26Q70HW3 274 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF611Q8N823 705 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 OR51D1Q8NGF3 324 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SLAMF9Q96A28 289 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SPSB1Q96BD6 273 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 C6orf62Q9GZU0 229 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 METTL17Q9H7H0 456 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 NKIRAS2Q9NYR9 191 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 CACNG2Q9Y698 323 aa13.07□□□□□ -0.32
PDLIM5-202ENST00000318007 SPG11Q96JI7 2443 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 ARFGEF3Q5TH69 2177 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 USF3Q68DE3 2245 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 A0A1W2PP11 408 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 PQLC2LA1A4F0 135 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 IFITM5A6NNB3 132 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 AKR7A2O43488 359 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 ERCC1P07992 297 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 RORCP51449 518 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 ATP1B3P54709 279 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 KRTAP10-9P60411 292 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 GNG3P63215 75 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 LHFPL2Q6ZUX7 228 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 MOGAT3Q86VF5 341 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 NKAIN3Q8N8D7 197 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 DTX3Q8N9I9 347 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 BOLLQ8N9W6 283 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 C19orf18Q8NEA5 215 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 OR5A2Q8NGI9 324 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF671Q8TAW3 534 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 PLEKHF2Q9H8W4 249 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 CBLN4Q9NTU7 201 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 DECR2Q9NUI1 292 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 COMMD3Q9UBI1 195 aa13.06□□□□□ -0.32
PDLIM5-202ENST00000318007 FAM221AA4D161 298 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 NOTOA8MTQ0 251 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 LYNX1G3V0Z9 82 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF701M0R085 212 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 NDUFS7O75251 213 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 LYNX1P0DP58 116 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 PRF1P14222 555 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 PRKACBP22694 351 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 HTR2CP28335 458 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 EFNB3Q15768 340 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 SLC22A6Q4U2R8 563 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 TPRA1Q86W33 373 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 SCCPDHQ8NBX0 429 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 BCL7BQ9BQE9 202 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 CXXC4Q9H2H0 198 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 SAP30LQ9HAJ7 183 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 DCAF16Q9NXF7 216 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 ING4Q9UNL4 249 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 RGS5O15539 181 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 SERPINA2P20848 420 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 SOX6P35712 828 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 GLIPR1L1Q6UWM5 242 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 SEH1LQ96EE3 360 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 MEGF10Q96KG7 1140 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 SORCS2Q96PQ0 1159 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 PMF1-BGLAPU3KQ54 211 aa13.05□□□□□ -0.32
PDLIM5-202ENST00000318007 APCP25054 2843 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 DSCAMO60469 2012 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 F8VVB4 439 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 F8VWA3 439 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 AIPO00170 330 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 HPXP02790 462 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 PTGFRP43088 359 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 NPBWR2P48146 333 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 RAB11BQ15907 218 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 MOGQ16653 247 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 OR51F2Q8NH61 342 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 LGALS14Q8TCE9 139 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 S100A13Q99584 98 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms