RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Nkx3-1P97436 237 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Dhrs9Q58NB6 319 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r195Q5SVD6 316 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Onecut2Q6XBJ3 505 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gng5Q80SZ7 68 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Eif5a2Q8BGY2 153 aaKnown RBP8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Uba3Q8C878 462 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r6Q8R2D4 303 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr342Q8VGK7 312 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ss18l2Q9D174 77 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Rhox2aQ9D4Y3 191 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Bpifa3Q9D9J8 232 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Med27Q9DB40 311 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Sema4gQ9WUH7 837 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr936J3KMV2 267 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn2r102L7N279 857 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 OtpO09113 325 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tk1P04184 233 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Hoxb7P09024 217 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 En2P09066 324 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Cdx1P18111 268 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Fgf7P36363 194 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ppp2cbP62715 309 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 BtrcQ3ULA2 605 aaKnown RBP8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ctxn2Q3URE8 81 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tmem140Q8BGY5 185 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tmem74Q8BQU7 305 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Clip4Q8CI96 704 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Plbd1Q8VCI0 550 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tmem267Q8VDR5 215 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Lpcat3Q91V01 487 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ascl3Q9JJR7 174 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Wdr17E9Q271 1322 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 4930433I11RikA0A0U1RPT6 723 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr1157A2AVC4 312 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr39E9PVX1 319 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gata3P23772 443 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Rpl3P27659 403 aaKnown RBP8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Zfp677Q6PEP4 634 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Slc22a20Q80UJ1 556 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Lcn10Q810Z1 182 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Mrgprb3Q91ZC1 312 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Nudcd2Q9CQ48 157 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Q9CWB7 115 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gins1Q9CZ15 196 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 MmachcQ9CZD0 279 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Necap2Q9D1J1 266 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Cxcl14Q9WUQ5 99 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Bub3Q9WVA3 326 aa8.08□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Trav13-1A0A075B644 110 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tmem235B1AQL3 211 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm15091B1AZM2 449 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gfra3O35118 397 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 MscO88940 201 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 MplQ08351 625 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tas2r113Q7M711 309 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr1105Q7TR58 312 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Atg5Q99J83 275 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Kcnmb2Q9CZM9 235 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 ManbalQ9D8X0 85 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tex29Q9DA77 186 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm11214V9GX06 183 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Shroom2A2ALU4 1481 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Siva1O54926 175 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Hsd17b12O70503 312 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 SlbpP97440 275 aaKnown RBP8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ubxn2bQ0KL01 331 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Lrrc55Q3UY51 311 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Abhd10Q6PE15 297 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr1283Q7TQY4 305 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Slc25a41Q8BVN7 312 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Cldn17Q8BXA6 224 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Fam110aQ8R184 296 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr136Q8VG72 312 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr1413Q8VGU3 323 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr691Q8VGW5 322 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr656Q8VGX9 329 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Derl1Q99J56 251 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ufc1Q9CR09 167 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Dnajc4Q9D844 244 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Pds5bQ4VA53 1446 aaKnown RBP8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Slc43a3A2AVZ9 502 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Trgv2A2J008 116 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r9A2RST7 299 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Psmb1O09061 240 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 BokO35425 213 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Foxa2P35583 459 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tpt1P63028 172 aaKnown RBP8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Itgb2lQ3UV74 738 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Commd3Q63829 195 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tmbim1Q8BJZ3 309 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Sh3rf2Q8BZT2 735 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Defa22Q8C1N8 93 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Cml2Q8CHQ9 238 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Cyp51a1Q8K0C4 503 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Uqcc3Q8K2T4 89 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 FevQ8QZW2 237 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr47Q8VF18 321 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr1151Q8VFQ8 308 aa8.07□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Med29Q9DB91 199 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms