RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Bud23Q9CY21 281 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Csnk1dQ9DC28 415 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 FAM186AQ9D9R9 1790 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm15737D3YZR0 106 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gja4P28235 333 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr835Q7TRG7 311 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 A730061H03RikQ8BGD2 154 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 LmlnQ8BMN4 681 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Syt6Q9R0N8 511 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 4930595M18RikA2RRY9 829 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 MgmtP26187 211 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gabrb1P50571 474 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Pitx1P70314 315 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Rab42Q0PD08 215 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mgst1Q91VS7 155 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Nova1Q9JKN6 507 aaKnown RBP12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Reep6Q9JM62 201 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Tbx15O70306 602 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 StsP50427 624 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 CebpdQ00322 268 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 CpeQ00493 476 aa12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Lin28bQ45KJ6 247 aaKnown RBP12.79□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Ltc4sQ60860 150 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr138Q7TRI7 312 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Ablim2Q8BL65 612 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mrpl38Q8K2M0 380 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr136Q8VG72 312 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Igkv18-36A0A075B5M9 114 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr1406E9Q8X1 310 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gpm6aP35802 278 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Hist1h1bP43276 223 aaKnown RBP12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Wdr34Q5U4F6 535 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Fbxo27Q6DIA9 280 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Galnt2Q6PB93 570 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Q8BZE1 841 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 NcmapQ99JS0 100 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Jag1Q9QXX0 1218 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Arap2Q8BZ05 1703 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr1289A0A288CFY5 326 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 CckarO08786 436 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vmn1r26Q8R2D7 339 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zdhhc5Q8VDZ4 715 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Acer3Q9D099 267 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 NagkQ9QZ08 343 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm7697A0A0J9YUH2 350 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm9495A0A0J9YUZ3 350 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Nat8f7E0CYR6 227 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Cd79aP11911 220 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr1058Q7TR74 316 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 NosipQ9D6T0 301 aaKnown RBP12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Cyb5r1Q9DB73 305 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Phf1Q9Z1B8 559 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Sbf2E9PXF8 1872 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zfp867E9Q2M4 473 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Ceacam3E9Q6J4 706 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Rpl29P47915 160 aaKnown RBP12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Runx3Q64131 409 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr890Q7TRD9 314 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 TsaccQ9DA44 124 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr1095A3KPP7 308 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 GsrP47791 500 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mospd3Q8BGG6 235 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 PxnQ8VI36 591 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mrps30Q9D0G0 442 aaKnown RBP12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Q9DAD0 168 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm3952A0A0A6YXJ1 191 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Slc18a3O35304 530 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mtnd6P03925 172 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 FblP35550 327 aaKnown RBP12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Hormad2Q5SQP1 306 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Slc16a13Q8CE94 428 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 TMEM121BQ99MX7 572 aa12.78□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Sult2a4L7N245 285 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Defa6P50704 93 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Rbp2Q08652 134 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Pdlim7Q3TJD7 457 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Spin2cQ6NVE3 257 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mvb12aQ78HU3 271 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr374Q7TRY0 313 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Chst8Q8BQ86 417 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Rell2Q8BRJ3 303 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Slc35a3Q8R1T4 326 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gabarapl1Q8R3R8 117 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Qrich2A0A140LIY9 2337 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Prr36E9PV26 1098 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Plscr5J3QM92 274 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Lmx1bO88609 395 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Hoxd4P10628 250 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Opn5Q6VZZ7 377 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Pxylp1Q8BHA9 480 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vmn1r234Q8R298 329 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vmn1r65Q9EPS7 332 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Hsd17b6Q9R092 317 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Klrc1Q9Z202 244 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr543E9PWI5 336 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Pcmt1P23506 227 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Tex261Q62302 196 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr1113Q7TR54 326 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Aph1bQ8C7N7 257 aa12.77□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Lrrc61Q8R2R5 259 aa12.77□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms