RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ECI1P42126 302 aa11.48□□□□□ -0.57
SKP2-209ENST00000620197 ACY1Q03154 408 aa11.48□□□□□ -0.57
SKP2-209ENST00000620197 C16orf47Q6ZP98 133 aaPredicted RBP11.48□□□□□ -0.57
SKP2-209ENST00000620197 C7orf61Q8IZ16 206 aa11.48□□□□□ -0.57
SKP2-209ENST00000620197 LRTM2Q8N967 370 aa11.48□□□□□ -0.57
SKP2-209ENST00000620197 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
SKP2-209ENST00000620197 MESP1Q9BRJ9 268 aa11.48□□□□□ -0.57
SKP2-209ENST00000620197 LIME1Q9H400 295 aa11.48□□□□□ -0.57
SKP2-209ENST00000620197 TNRC6BQ9UPQ9 1833 aaKnown RBP11.48□□□□□ -0.57
SKP2-209ENST00000620197 IGHV1OR21-1A0A087WYE8 117 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 SUCLG1P53597 346 aaKnown RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 SWI5Q1ZZU3 235 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 SLC16A13Q7RTY0 426 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 ZNF101Q8IZC7 436 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 HIST1H2BAQ96A08 127 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 MALSU1Q96EH3 234 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 WDR77Q9BQA1 342 aaPredicted RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 A0A1W2PPE3 182 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 TERTO14746 1132 aaKnown RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 IGHV2-5P01817 119 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 LTBRP36941 435 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 SNU13P55769 128 aaKnown RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 GABREP78334 506 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 FAM209BQ5JX69 171 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 Q6ZS52 159 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 HRH4Q9H3N8 390 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 C11orf1Q9H5F2 150 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 TINAGQ9UJW2 476 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 A0A1B0GW64 132 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 FABP1P07148 127 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 CTSDP07339 412 aaPredicted RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 OR8U9P0C7N5 309 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 SNCAP37840 140 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 EIF5AP63241 154 aaKnown RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 PEA15Q15121 130 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 ABHD12BQ7Z5M8 362 aaPredicted RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 ANKRD37Q7Z713 158 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 OR8U1Q8NH10 309 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 LMX1AQ8TE12 382 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 CPNE2Q96FN4 548 aaPredicted RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 KIRREL1Q96J84 757 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 GINS3Q9BRX5 216 aa11.47□□□□□ -0.57
SKP2-209ENST00000620197 MCTS1Q9ULC4 181 aaKnown RBP11.47□□□□□ -0.57
SKP2-209ENST00000620197 NCOA6Q14686 2063 aaPredicted RBP11.46□□□□□ -0.57
SKP2-209ENST00000620197 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 FARS2O95363 451 aaKnown RBP11.46□□□□□ -0.57
SKP2-209ENST00000620197 ONECUT2O95948 504 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 IFNA2P01563 188 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 ZNF16P17020 682 aaPredicted RBP11.46□□□□□ -0.57
SKP2-209ENST00000620197 KISS1Q15726 138 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 FAM219AQ8IW50 185 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 COMMD1Q8N668 190 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 OR10H5Q8NGA6 315 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 NECAB3Q96P71 396 aaPredicted RBP11.46□□□□□ -0.57
SKP2-209ENST00000620197 CLCC1Q96S66 551 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 NAA11Q9BSU3 229 aaPredicted RBP11.46□□□□□ -0.57
SKP2-209ENST00000620197 SMCO4Q9NRQ5 59 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 ARID1AO14497 2285 aa11.46□□□□□ -0.57
SKP2-209ENST00000620197 RER1O15258 196 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 EIF1BO60739 113 aaKnown RBP11.46□□□□□ -0.58
SKP2-209ENST00000620197 MED6O75586 246 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 JTBO76095 146 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 IGHG1P01857 330 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 DANCRP0C864 163 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 MSX1P28360 303 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 CDAP32320 146 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 EIF1P41567 113 aaKnown RBP11.46□□□□□ -0.58
SKP2-209ENST00000620197 GRB2P62993 217 aaKnown RBP11.46□□□□□ -0.58
SKP2-209ENST00000620197 HMGN3Q15651 99 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 UBE2V2Q15819 145 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.58
SKP2-209ENST00000620197 EDARADDQ8WWZ3 215 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 NABP1Q96AH0 204 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 TMEM41AQ96HV5 264 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 ZNF251Q9BRH9 671 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 C1orf123Q9NWV4 160 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 FBXL17Q9UF56 701 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 ZDHHC8Q9ULC8 765 aa11.46□□□□□ -0.58
SKP2-209ENST00000620197 VSTM2BA6NLU5 285 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 SHISA8B8ZZ34 492 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 AMY2BP19961 511 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 PTAFRP25105 342 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 CD27P26842 260 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
SKP2-209ENST00000620197 C10orf128Q5T292 105 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 SYT13Q7L8C5 426 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 KMT5CQ86Y97 462 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 FADS6Q8N9I5 356 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 C10orf35Q96D05 121 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 URM1Q9BTM9 101 aaKnown RBP11.45□□□□□ -0.58
SKP2-209ENST00000620197 NKX2-4Q9H2Z4 354 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 EDARQ9UNE0 448 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 DHRS7CA6NNS2 312 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 CRTAPO75718 401 aaPredicted RBP11.45□□□□□ -0.58
SKP2-209ENST00000620197 DHPSP49366 369 aaPredicted RBP11.45□□□□□ -0.58
SKP2-209ENST00000620197 LSM6P62312 80 aaKnown RBP11.45□□□□□ -0.58
SKP2-209ENST00000620197 H3F3AP84243 136 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 COL19A1Q14993 1142 aa11.45□□□□□ -0.58
SKP2-209ENST00000620197 SHHQ15465 462 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms