RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ATF1P18846 271 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 THBS2P35442 1172 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 PMELP40967 661 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 SOX2P48431 317 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 FUT6P51993 359 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 DOC2BQ14184 412 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 CNN3Q15417 329 aaKnown RBP13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 UBE2V2Q15819 145 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 SPNS3Q6ZMD2 512 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 C1orf87Q8N0U7 546 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 PARP16Q8N5Y8 322 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 Q8TCH9 128 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 HPSE2Q8WWQ2 592 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 RGP1Q92546 391 aaPredicted RBP13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 FCGR1BQ92637 280 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 TIMD4Q96H15 378 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 ZCCHC4Q9H5U6 513 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 C1orf123Q9NWV4 160 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 USF3Q68DE3 2245 aa13.14□□□□□ -0.31
SLC6A4-205ENST00000579221 A0A087WXM4 84 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 TRBV5-5A0A0J9YX44 114 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 FAM230AA0A1W2PPH8 454 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 LRP5LA4QPB2 252 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 VWC2LB2RUY7 222 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 ALX3O95076 343 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 OCMP0CE72 109 aaPredicted RBP13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 CPEP16870 476 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 PCMT1P22061 227 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 PRKACBP22694 351 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 NR4A2P43354 598 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 ZNF154Q13106 437 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 TRAM1Q15629 374 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 Q499Y3 187 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 ARMCX4Q5H9R4 360 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 DMRTC1Q5HYR2 192 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 UBE2UQ5VVX9 321 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 LIPKQ5VXJ0 399 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 TGIF2LYQ8IUE0 185 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 TSPAN14Q8NG11 270 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 THRSPQ92748 146 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 OPALINQ96PE5 141 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 NR1H4Q96RI1 486 aaPredicted RBP13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 FGF23Q9GZV9 251 aaPredicted RBP13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 OR51I2Q9H344 312 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 RNF7Q9UBF6 113 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 TACC2O95359 2948 aa13.13□□□□□ -0.31
SLC6A4-205ENST00000579221 POLQO75417 2590 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 NAV2Q8IVL1 2488 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 PQLC2LA1A4F0 135 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 CDIPTO14735 213 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 ATP1B3P54709 279 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 RPS11P62280 158 aaKnown RBP eCLIP13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 WDR86Q86TI4 376 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 ZNF573Q86YE8 665 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 C11orf53Q8IXP5 236 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 SCCPDHQ8NBX0 429 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 DNAAF1Q8NEP3 725 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 OR13C5Q8NGS8 318 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 ZNF671Q8TAW3 534 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 TRMT10AQ8TBZ6 339 aaKnown RBP13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 RPL3LQ92901 407 aaKnown RBP13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 BORCS8Q96FH0 119 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 TMED9Q9BVK6 235 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 REG4Q9BYZ8 158 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 BPESC1Q9GZL8 116 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 ZNF696Q9H7X3 374 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 NPTNQ9Y639 398 aa13.12□□□□□ -0.31
SLC6A4-205ENST00000579221 ANKRD17O75179 2603 aaKnown RBP13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 hCG_1807616A0A1W2PRN6 198 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 TRIM64BA6NI03 449 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 RNF223E7ERA6 249 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 MAGEB3O15480 346 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 CYB5R3P00387 301 aaPredicted RBP13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 RAB3AP20336 220 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 MAPK3P27361 379 aaPredicted RBP13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 CFHR2P36980 270 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 RBP2P50120 134 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 ZNF826PQ6ZT77 177 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 PHC2Q8IXK0 858 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 OR13C9Q8NGT0 318 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 NPRL2Q8WTW4 380 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 SPSB1Q96BD6 273 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 DCAF16Q9NXF7 216 aa13.11□□□□□ -0.31
SLC6A4-205ENST00000579221 SETXQ7Z333 2677 aaKnown RBP13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 PPIAL4EA0A075B759 164 aa13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 IGKV1-9A0A0C4DH69 117 aa13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 PPIAL4DF5H284 164 aa13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 SULT1B1O43704 296 aa13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 PPIAL4FP0DN26 164 aa13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 USF1P22415 310 aaPredicted RBP13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 AZGP1P25311 298 aaKnown RBP13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 PSMA1P25786 263 aaKnown RBP13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 PSMB9P28065 219 aa13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 TGFBR2P37173 567 aa13.1□□□□□ -0.31
SLC6A4-205ENST00000579221 HAAOP46952 286 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms