RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TRAV8-7A0A075B6U6 113 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 TRAV1-2A0A0B4J238 106 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SMIM30A4D0T7 59 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 FAM221AA4D161 298 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZSCAN5BA6NJL1 495 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 TMEM210A6NLX4 147 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 E7EQL1 145 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SPRY3O43610 288 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 GMDSO60547 372 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CDRT1O95170 752 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 PLATP00750 562 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 IL1AP01583 271 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 ATF1P18846 271 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SRMP19623 302 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SSTR2P30874 369 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZNF93P35789 620 aaPredicted RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 MAGEB1P43366 347 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 POU3F4P49335 361 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SRP9P49458 86 aaKnown RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 EVX1P49640 407 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 RBP2P50120 134 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 PSMD7P51665 324 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 GPM6AP51674 278 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 ATP1B3P54709 279 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 MTCP1P56278 107 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 GNG3P63215 75 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 TNFAIP6P98066 277 aaPredicted RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 HNRNPA0Q13151 305 aaKnown RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 EFNB3Q15768 340 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CTF1Q16619 201 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 PCGF3Q3KNV8 242 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CEACAM21Q3KPI0 293 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SP5Q6BEB4 398 aaPredicted RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 AWAT2Q6E213 333 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 Q6ZSR3 168 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 LRP11Q86VZ4 500 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CROCCP3Q8IVE0 287 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 ACBD4Q8NC06 268 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 DNAAF1Q8NEP3 725 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 NDNFQ8TB73 568 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 AP3S1Q92572 193 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 C12orf43Q96C57 262 aaKnown RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 FOXRED1Q96CU9 486 aaPredicted RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 ORAI1Q96D31 301 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 TRMT61AQ96FX7 289 aaKnown RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 RNF170Q96K19 258 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SORCS2Q96PQ0 1159 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CCL19Q99731 98 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SLC30A2Q9BRI3 323 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 DCUN1D5Q9BTE7 237 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 EGLN1Q9GZT9 426 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 RBM38Q9H0Z9 239 aaKnown RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 DCSTAMPQ9H295 470 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CXXC4Q9H2H0 198 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 TPK1Q9H3S4 243 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 MS4A5Q9H3V2 200 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 RNF167Q9H6Y7 350 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 METTL17Q9H7H0 456 aaPredicted RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 SAP30LQ9HAJ7 183 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 MSL2Q9HCI7 577 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CBLN4Q9NTU7 201 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 DECR2Q9NUI1 292 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZDHHC8Q9ULC8 765 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 POLDIP2Q9Y2S7 368 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 CEPT1Q9Y6K0 416 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 PMF1-BGLAPU3KQ54 211 aa5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 RP1L1Q8IWN7 2480 aaPredicted RBP5.62□□□□□ -1.51
CTDNEP1-204ENST00000570484 hCG_1807616A0A1W2PRN6 198 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 LRP5LA4QPB2 252 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 NOTOA8MTQ0 251 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZNF732B4DXR9 585 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 F5H5P2 479 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 PIN1P1O15428 100 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 CTAG2O75638 210 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 ALX3O95076 343 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 NAT2P11245 290 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 IRF2P14316 349 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 IGFBP3P17936 291 aaPredicted RBP5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 TNFRSF1AP19438 455 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 LOXP28300 417 aaPredicted RBP5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 SDC2P34741 201 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 HAAOP46952 286 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 PPOXP50336 477 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 MMP15P51511 669 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 FUT6P51993 359 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 CAPZA1P52907 286 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 TNK1Q13470 666 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 SPCS2Q15005 226 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 TESK1Q15569 626 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 UBE2V2Q15819 145 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 RAB11BQ15907 218 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 FAM209AQ5JX71 171 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 TMEM42Q69YG0 159 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 SFXN4Q6P4A7 337 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 FIP1L1Q6UN15 594 aaKnown RBP5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 UNQ9370/PRO34162Q6UXP9 181 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZNF573Q86YE8 665 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZNF611Q8N823 705 aa5.61□□□□□ -1.51
CTDNEP1-204ENST00000570484 OR5A2Q8NGI9 324 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms