RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 RIPPLY3P57055 190 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 CNN3Q15417 329 aaKnown RBP12.97□□□□□ -0.33
KNOP1-203ENST00000565844 CEACAM21Q3KPI0 293 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 ZCCHC24Q8N2G6 241 aaKnown RBP12.97□□□□□ -0.33
KNOP1-203ENST00000565844 OR1M1Q8NGA1 313 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 HPSE2Q8WWQ2 592 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 OR5P3Q8WZ94 311 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 NINJ1Q92982 152 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 ITPKCQ96DU7 683 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 TECTBQ96PL2 329 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 DIRC2Q96SL1 478 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 FOXC2Q99958 501 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 VRK1Q99986 396 aaPredicted RBP12.97□□□□□ -0.33
KNOP1-203ENST00000565844 RTL8AQ9BWD3 113 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 CACNG6Q9BXT2 260 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 TCF7L1Q9HCS4 588 aa12.97□□□□□ -0.33
KNOP1-203ENST00000565844 CD99P14209 185 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 IGFBP3P17936 291 aaPredicted RBP12.96□□□□□ -0.33
KNOP1-203ENST00000565844 ATF1P18846 271 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 RAB3AP20336 220 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 TNFSF4P23510 183 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.33
KNOP1-203ENST00000565844 TNFAIP6P98066 277 aaPredicted RBP12.96□□□□□ -0.33
KNOP1-203ENST00000565844 SLC16A12Q6ZSM3 486 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 OR51A2Q8NGJ7 313 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 TRMT10AQ8TBZ6 339 aaKnown RBP12.96□□□□□ -0.33
KNOP1-203ENST00000565844 MICU1Q9BPX6 476 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 CENPOQ9BU64 300 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 NAA50Q9GZZ1 169 aaKnown RBP12.96□□□□□ -0.33
KNOP1-203ENST00000565844 SLITRK2Q9H156 845 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 CXXC4Q9H2H0 198 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 NKIRAS2Q9NYR9 191 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 FOXJ3Q9UPW0 622 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 SLC7A11Q9UPY5 501 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 GSTK1Q9Y2Q3 226 aa12.96□□□□□ -0.33
KNOP1-203ENST00000565844 NF1P21359 2839 aa12.96□□□□□ -0.34
KNOP1-203ENST00000565844 IGKV1-9A0A0C4DH69 117 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 FAM230AA0A1W2PPH8 454 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 TPD52L2O43399 206 aaKnown RBP12.95□□□□□ -0.34
KNOP1-203ENST00000565844 MAS1P04201 325 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 ERCC1P07992 297 aaPredicted RBP12.95□□□□□ -0.34
KNOP1-203ENST00000565844 ADH4P08319 380 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 HCKP08631 526 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 SRMP19623 302 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 PRKACBP22694 351 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 MYL9P24844 172 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 AZGP1P25311 298 aaKnown RBP12.95□□□□□ -0.34
KNOP1-203ENST00000565844 CDKN1AP38936 164 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 GPM6AP51674 278 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 LSM3P62310 102 aaKnown RBP12.95□□□□□ -0.34
KNOP1-203ENST00000565844 CCL8P80075 99 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 MZT1Q08AG7 82 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 PCGF3Q3KNV8 242 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 ZNF529Q6P280 563 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 GDPGP1Q6ZNW5 385 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 ANKRD13BQ86YJ7 626 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 TGIF2LYQ8IUE0 185 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 CLVS1Q8IUQ0 354 aaPredicted RBP12.95□□□□□ -0.34
KNOP1-203ENST00000565844 SPERTQ8NA61 448 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 OR5A2Q8NGI9 324 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 SPSB1Q96BD6 273 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 RNF170Q96K19 258 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 FGF23Q9GZV9 251 aaPredicted RBP12.95□□□□□ -0.34
KNOP1-203ENST00000565844 RNF167Q9H6Y7 350 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 NEK6Q9HC98 313 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 TMEM138Q9NPI0 162 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 C14orf119Q9NWQ9 140 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 ARID1AO14497 2285 aa12.95□□□□□ -0.34
KNOP1-203ENST00000565844 IGHV3-64DA0A0J9YX35 117 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 PQLC2LA1A4F0 135 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 OR5B21A6NL26 309 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 H7C417 338 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 MAGEB3O15480 346 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 ALX3O95076 343 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 GABARAPO95166 117 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 THBS2P35442 1172 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 SRP9P49458 86 aaKnown RBP12.94□□□□□ -0.34
KNOP1-203ENST00000565844 FAM209AQ5JX71 171 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 IGFBPL1Q8WX77 278 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 BORCS8Q96FH0 119 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 KCTD7Q96MP8 289 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 OR2V2Q96R30 315 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 EGLN1Q9GZT9 426 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 RAB1BQ9H0U4 201 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 CXorf56Q9H5V9 222 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 SNTG1Q9NSN8 517 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 DECR2Q9NUI1 292 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
KNOP1-203ENST00000565844 TANC2Q9HCD6 1990 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 LOC100289279A0A1B0GTE1 492 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 ZNF732B4DXR9 585 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 CD55P08174 381 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 BDKRB2P30411 391 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 CD200P41217 278 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 FUT6P51993 359 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 MTCP1P56278 107 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 GNG3P63215 75 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 MAB21L1Q13394 359 aa12.94□□□□□ -0.34
KNOP1-203ENST00000565844 DEFB113Q30KQ7 82 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms