RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 BATF2Q8N1L9 274 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FNDC9Q8TBE3 224 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAM213BQ8TBF2 198 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PIGQQ9BRB3 760 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ZNF2Q9BSG1 426 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ASH2LQ9UBL3 628 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAM221BA6H8Z2 402 aa18.08■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PLXDC2Q6UX71 529 aa18.08■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ABHD14AQ9BUJ0 271 aa18.08■□□□□ 0.49
MAP1LC3B-206ENST00000564844 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.49
MAP1LC3B-206ENST00000564844 AP4M1O00189 453 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ISG15P05161 165 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 OMGP23515 440 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 POLR2HP52434 150 aaKnown RBP18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 HSD17B7P56937 341 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TMEM182Q6ZP80 229 aaPredicted RBP18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 C20orf196Q8IYI0 205 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 MFSD8Q8NHS3 518 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PRRX2Q99811 253 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 WFDC1Q9HC57 220 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 KCNJ16Q9NPI9 418 aa18.08■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TMEM150CB9EJG8 249 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 RAB2AP61019 212 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TMEM268Q5VZI3 342 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 GGNBP1Q5YKI7 109 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 NUP54Q7Z3B4 507 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 DYRK2Q92630 601 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PTX4Q96A99 478 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 METTL1Q9UBP6 276 aaKnown RBP18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 C14orf166Q9Y224 244 aaKnown RBP18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 B3GALT5Q9Y2C3 310 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 STMND1H3BQB6 276 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TNFSF12O43508 249 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 RAMP1O60894 148 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PET100P0DJ07 73 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 FPR2P25090 351 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 SNCAP37840 140 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ZNF121P58317 390 aaPredicted RBP18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PHLDA2Q53GA4 152 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 CPEB2Q7Z5Q1 589 aaKnown RBP18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 OR5AS1Q8N127 324 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ADIPOR1Q96A54 375 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 OCSTAMPQ9BR26 566 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TPSD1Q9BZJ3 242 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PARP11Q9NR21 331 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 FAM86C1Q9NVL1 165 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 E9PLN8 166 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 NXPH3O95157 252 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 FOLR2P14207 255 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 IGLV3-21P80748 117 aaPredicted RBP18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PDCD1Q15116 288 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PCK2Q16822 640 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 GFI1BQ5VTD9 330 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 RPUSD3Q6P087 351 aaKnown RBP18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ZNF529Q6P280 563 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 LANCL3Q6ZV70 420 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 RNF133Q8WVZ7 376 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PIGTQ969N2 578 aa18.07■□□□□ 0.48
MAP1LC3B-206ENST00000564844 DHRS7CA6NNS2 312 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 CDRT15L2A8MXV6 281 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 OR2C1O95371 312 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 CD37P11049 281 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 RPS2P15880 293 aaKnown RBP18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 SLC6A8P48029 635 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 GABRA4P48169 554 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 HSF1Q00613 529 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PYY3Q5JQD4 70 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ARRDC1Q8N5I2 433 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ZNF383Q8NA42 475 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 OR8B12Q8NGG6 310 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 SLC46A1Q96NT5 459 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 THEGLP0DJG4 465 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 KLK2P20151 261 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 MMP16P51512 607 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 EIF5AP63241 154 aaKnown RBP18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 RNF212Q495C1 297 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 Q7L0L9 218 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 SUMF1Q8NBK3 374 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 EGLN1Q9GZT9 426 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TOLLIPQ9H0E2 274 aa18.06■□□□□ 0.48
MAP1LC3B-206ENST00000564844 MT-ATP6P00846 226 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 TMEM156Q8N614 296 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ZNF283Q8N7M2 679 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 KCNG3Q8TAE7 436 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 OR10A2Q9H208 303 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 SUSD2Q9UGT4 822 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 NXT1Q9UKK6 140 aaKnown RBP18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 MEMO1Q9Y316 297 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 RALGAPA1Q6GYQ0 2036 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 DDAH2O95865 285 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 IGHV2-5P01817 119 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 AKT2P31751 481 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 C14orf28Q4W4Y0 310 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 P4HA3Q7Z4N8 544 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 SULF2Q8IWU5 870 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ZNF721Q8TF20 911 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 ASB10Q8WXI3 467 aa18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 C1orf147Q96MC9 270 aaPredicted RBP18.05■□□□□ 0.48
MAP1LC3B-206ENST00000564844 PRO1933Q9H354 126 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms