RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 NKIRAS2Q9NYR9 191 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 ABRACLQ9P1F3 81 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 TAAR3PQ9P1P4 343 aa14.41□□□□□ -0.1
SNX1-203ENST00000558040 SMG1Q96Q15 3661 aaKnown RBP14.4□□□□□ -0.1
SNX1-203ENST00000558040 CLPXO76031 633 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 SLC2A2P11168 524 aaPredicted RBP14.4□□□□□ -0.1
SNX1-203ENST00000558040 APOBEC3AP31941 199 aaPredicted RBP14.4□□□□□ -0.1
SNX1-203ENST00000558040 SERPINF1P36955 418 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 GNG3P63215 75 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 NKPD1Q17RQ9 610 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 HPSE2Q8WWQ2 592 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 RNF170Q96K19 258 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 SPACA5Q96QH8 159 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 DHRS9Q9BPW9 319 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 C6orf62Q9GZU0 229 aaPredicted RBP14.4□□□□□ -0.1
SNX1-203ENST00000558040 PPP1R3EQ9H7J1 279 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 CISD1Q9NZ45 108 aaKnown RBP14.4□□□□□ -0.1
SNX1-203ENST00000558040 PMF1-BGLAPU3KQ54 211 aa14.4□□□□□ -0.1
SNX1-203ENST00000558040 A0A1B0GWJ7 208 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 PQLC2LA1A4F0 135 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 PLAUP00749 431 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 CALCBP10092 127 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 GPM6AP51674 278 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 SCAND1P57086 179 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 DMRTC1Q5HYR2 192 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 LYPD6Q86Y78 171 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 DVL3Q92997 716 aaPredicted RBP14.39□□□□□ -0.11
SNX1-203ENST00000558040 CNTD2Q9H8S5 307 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 LIN7BQ9HAP6 207 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 SMURF1Q9HCE7 757 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 C14orf119Q9NWQ9 140 aa14.39□□□□□ -0.11
SNX1-203ENST00000558040 MYEF2Q9P2K5 600 aaKnown RBP14.39□□□□□ -0.11
SNX1-203ENST00000558040 TMEM210A6NLX4 147 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 A6NNC1 897 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 ZNF732B4DXR9 585 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 UBBP0CG47 229 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 S100A5P33763 92 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 THBS2P35442 1172 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 MMP15P51511 669 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 EFNB3Q15768 340 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 AWAT2Q6E213 333 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 FAM166AQ6J272 317 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 ZNF573Q86YE8 665 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 FBXL14Q8N1E6 418 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 TNFAIP8L1Q8WVP5 186 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 NEUROG1Q92886 237 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 S100A13Q99584 98 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 CXXC4Q9H2H0 198 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 MSL2Q9HCI7 577 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 FAIMQ9NVQ4 179 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 MRPS28Q9Y2Q9 187 aaKnown RBP14.38□□□□□ -0.11
SNX1-203ENST00000558040 PEX16Q9Y5Y5 336 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 ETV7Q9Y603 341 aa14.38□□□□□ -0.11
SNX1-203ENST00000558040 CADP27708 2225 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 B9A039 149 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 M0R233 179 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 RGS5O15539 181 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 MLNRO43193 412 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 BPNT1O95861 308 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 ARSBP15848 533 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 PTGFRP43088 359 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 OR3A4PP47883 348 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 ZNF81P51508 661 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 CLDN12P56749 244 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 P2RY14Q15391 338 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 Q6ZR03 302 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 LINC00299Q6ZSB3 139 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 ANGPTL5Q86XS5 388 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 OR2Z1Q8NG97 314 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 OR10AD1Q8NGE0 317 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 OR4D6Q8NGJ1 314 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 LILRB1Q8NHL6 650 aaPredicted RBP14.37□□□□□ -0.11
SNX1-203ENST00000558040 FBXW5Q969U6 566 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 RFT1Q96AA3 541 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 FAM3DQ96BQ1 224 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 DIRC2Q96SL1 478 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 COMMD3Q9UBI1 195 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 GHRLQ9UBU3 117 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 FBXO9Q9UK97 447 aaPredicted RBP14.37□□□□□ -0.11
SNX1-203ENST00000558040 ADAM30Q9UKF2 790 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 ZDHHC8Q9ULC8 765 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 SPATA2Q9UM82 520 aa14.37□□□□□ -0.11
SNX1-203ENST00000558040 ANKHD1Q8IWZ3 2542 aaKnown RBP14.37□□□□□ -0.11
SNX1-203ENST00000558040 IGKV1-27A0A075B6S5 117 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 LOC100289279A0A1B0GTE1 492 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 LRP5LA4QPB2 252 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 ZSCAN5BA6NJL1 495 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 H0YL77 283 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 CYB5AP00167 134 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 TMEM225BP0DP42 221 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 SNRPBP14678 240 aaKnown RBP14.36□□□□□ -0.11
SNX1-203ENST00000558040 TNFSF4P23510 183 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 HAAOP46952 286 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 POU3F4P49335 361 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 BMXP51813 675 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 OR51D1Q8NGF3 324 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 OR5D18Q8NGL1 313 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 LGALS14Q8TCE9 139 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 SLC25A28Q96A46 364 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 ELMOD3Q96FG2 381 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms