RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 VGLL3A8MV65 326 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 RER1O15258 196 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 GMDSO60547 372 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 ALDOBP05062 364 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 MUC1P15941 1255 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-236ENST00000556220 GPX2P18283 190 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 CA6P23280 308 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 AQP1P29972 269 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 TGM4P49221 684 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 LSM6P62312 80 aaKnown RBP5.48□□□□□ -1.53
ATXN3-236ENST00000556220 SCARB2Q14108 478 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 GK2Q14410 553 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-236ENST00000556220 DUSP7Q16829 419 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 RSPO1Q2MKA7 263 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-236ENST00000556220 TMEM95Q3KNT9 176 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 ALG10Q5BKT4 473 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 LRRC10Q5BKY1 277 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 WDR38Q5JTN6 314 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 ZFAND6Q6FIF0 208 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 LCN8Q6JVE9 175 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 TBPL2Q6SJ96 375 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 ADAMTSL5Q6ZMM2 481 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 CENPVQ7Z7K6 275 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-236ENST00000556220 FAM216BQ8N7L0 139 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 GPR32P1Q8NGA4 272 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 OR4D11Q8NGI4 311 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 OR5D13Q8NGL4 314 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 PFN4Q8NHR9 129 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 SPRYD4Q8WW59 207 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-236ENST00000556220 MYDGFQ969H8 173 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 CMTM5Q96DZ9 223 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 DUS3LQ96G46 650 aaKnown RBP5.48□□□□□ -1.53
ATXN3-236ENST00000556220 RCHY1Q96PM5 261 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 TMEM38AQ9H6F2 299 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 EFCAB1Q9HAE3 211 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 RNPEPL1Q9HAU8 725 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 AURKCQ9UQB9 309 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 TCF19Q9Y242 345 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 NDUFAF1Q9Y375 327 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 SNX13Q9Y5W8 968 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 hCG_1807616A0A1W2PRN6 198 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 A6NIZ1 184 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 A6NLC8 198 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 BBIP1A8MTZ0 92 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 M0QX08 132 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 ATP5HO75947 161 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 GRPP07492 148 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 TNFRSF1BP20333 461 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 RAB13P51153 203 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 CTXN1P60606 82 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 RAP1BP61224 184 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 RAP1AP62834 184 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 ECH1Q13011 328 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 MALLQ13021 153 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 BLMHQ13867 455 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 RCN1Q15293 331 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 PCK2Q16822 640 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 DNAL1Q4LDG9 190 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 ATPAF1Q5TC12 328 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-236ENST00000556220 LPCAT4Q643R3 524 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 PGAP1Q75T13 922 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 TMEM219Q86XT9 240 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 NKAIN4Q8IVV8 208 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 C11orf53Q8IXP5 236 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 KIRREL3Q8IZU9 778 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 LRRC75AQ8NAA5 344 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 OR9Q1Q8NGQ5 310 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 OR10A6Q8NH74 314 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 CANT1Q8WVQ1 401 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 H1FXQ92522 213 aaKnown RBP5.47□□□□□ -1.53
ATXN3-236ENST00000556220 TAMM41Q96BW9 452 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 C12orf43Q96C57 262 aaKnown RBP5.47□□□□□ -1.53
ATXN3-236ENST00000556220 MNTQ99583 582 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 COQ7Q99807 217 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 SLC29A1Q99808 456 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 S100A14Q9HCY8 104 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 PITPNC1Q9UKF7 332 aa5.47□□□□□ -1.53
ATXN3-236ENST00000556220 FAM90A8PA6NJQ4 464 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 CD300LBA8K4G0 201 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 FAM220BPB1ANY3 271 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 H0YAE9 185 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 H7C1C5 153 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 AHCYL1O43865 530 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 GLCEO94923 617 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 SELLP14151 372 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 CTLA4P16410 223 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 POU1F1P28069 291 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 PEX2P28328 305 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 RBM34P42696 430 aaKnown RBP5.46□□□□□ -1.54
ATXN3-236ENST00000556220 THBS3P49746 956 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 LCN6P62502 163 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 IL5RAQ01344 420 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 MZT1Q08AG7 82 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 TRIM25Q14258 630 aaKnown RBP5.46□□□□□ -1.54
ATXN3-236ENST00000556220 GK3PQ14409 553 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 KRTAP27-1Q3LI81 207 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 OTPQ5XKR4 325 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 SBSPONQ8IVN8 264 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 HS3ST5Q8IZT8 346 aa5.46□□□□□ -1.54
ATXN3-236ENST00000556220 GJC3Q8NFK1 279 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms