RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 BGLAPP02818 100 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 H2BFMP0C1H6 154 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 SMIM6P0DI80 62 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 FOLR3P41439 243 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 IL13RA1P78552 427 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 FAM76BQ5HYJ3 339 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 FNDC7Q5VTL7 733 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 TRAPPC6BQ86SZ2 158 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 ADAD2Q8NCV1 583 aaKnown RBP12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 RNF128Q8TEB7 428 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 GPR37O15354 613 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 EFSO43281 561 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 TLX3O43711 291 aaPredicted RBP12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 IGKV3-11P04433 115 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 IFNA6P05013 189 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 GNB3P16520 340 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 RAB6AP20340 208 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 IGLV3-21P80748 117 aaPredicted RBP12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 DEFA6Q01524 100 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
SFSWAP-210ENST00000541286 COX6A1P12074 109 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 PCOLCEQ15113 449 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 EMC4Q5J8M3 183 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 OR5M8Q8NGP6 311 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 RPS4Y2Q8TD47 263 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 GPX8Q8TED1 209 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 NPRL2Q8WTW4 380 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 NRIP2Q9BQI9 281 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 PTGES2Q9H7Z7 377 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 P4HTMQ9NXG6 502 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 OR52A1Q9UKL2 312 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 H7C1Q1 480 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 PMP2P02689 132 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 FJX1Q86VR8 437 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 NFAM1Q8NET5 270 aaPredicted RBP12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 OR10H5Q8NGA6 315 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 SULT4A1Q9BR01 284 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 IGKV1D-43A0A0B4J1Z2 117 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 RNASEK-C17orf49H0YIS7 233 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 PHYHO14832 338 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 ZNHIT1O43257 154 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 MED6O75586 246 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 EBPQ15125 230 aaKnown RBP12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 OR52N5Q8NH56 324 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 PHF3Q92576 2039 aaKnown RBP12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 GGACTQ9BVM4 153 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 ACKR4Q9NPB9 350 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 PLA2G3Q9NZ20 509 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 VSIG4Q9Y279 399 aa12.64□□□□□ -0.39
SFSWAP-210ENST00000541286 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 CDRT15L2A8MXV6 281 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 KLK10O43240 276 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 ADAP1O75689 374 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 OR2F2O95006 317 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 TXNDC12O95881 172 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 OR8U8P0C7N1 319 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 NDUFB7P17568 137 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 SLC6A8P48029 635 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 RNF4P78317 190 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 FOXK1P85037 733 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 OR2F1Q13607 317 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 SGCBQ16585 318 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 GALNTL5Q7Z4T8 443 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 ADGRE4PQ86SQ3 457 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 BAP18Q8IXM2 172 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 ZNF383Q8NA42 475 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 OR52N4Q8NGI2 321 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 S100PBPQ96BU1 408 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 DDA1Q9BW61 102 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 ADAM19Q9H013 955 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 TXNIPQ9H3M7 391 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 FN3KRPQ9HA64 309 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 AMDHD2Q9Y303 409 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 NUP210LQ5VU65 1888 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 PCNX1Q96RV3 2341 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 ARGFXA6NJG6 315 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 PMS2P2O95744 297 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 HRH1P35367 487 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 TLE3Q04726 772 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 LINC00696Q6ZRV3 163 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 NUP54Q7Z3B4 507 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 OR5D18Q8NGL1 313 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 OR1N1Q8NGS0 311 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 SLC25A43Q8WUT9 341 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 TMEM41AQ96HV5 264 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 SUCNR1Q9BXA5 334 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 CNTD2Q9H8S5 307 aa12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
SFSWAP-210ENST00000541286 IGHV1-45A0A0A0MS14 117 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 A0A1W2PPE2 198 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 FRG2CA6NGY1 282 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 ERCC1P07992 297 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 ITGA3P26006 1051 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 SLC26A5P58743 744 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 DHRS11Q6UWP2 260 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 RNF144BQ7Z419 303 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms