RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 C1orf100Q5SVJ3 147 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 LRRC28Q86X40 367 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-207ENST00000539047 SAMD12Q8N8I0 201 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 SPERTQ8NA61 448 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 OR5A2Q8NGI9 324 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 OR13G1Q8NGZ3 307 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 FAM222BQ8WU58 562 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 WDR12Q9GZL7 423 aaKnown RBP13.21□□□□□ -0.29
VAMP1-207ENST00000539047 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-207ENST00000539047 CYSLTR2Q9NS75 346 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 CA10Q9NS85 328 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 GHRLQ9UBU3 117 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 FZR1Q9UM11 496 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 SPATA2Q9UM82 520 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 PTPN13Q12923 2485 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 LRRK2Q5S007 2527 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 RTTNQ86VV8 2226 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 LOC100289279A0A1B0GTE1 492 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 IGHV3-13P01766 116 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 SNRPBP14678 240 aaKnown RBP13.2□□□□□ -0.3
VAMP1-207ENST00000539047 GNG3P63215 75 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 SNTB1Q13884 538 aaKnown RBP13.2□□□□□ -0.3
VAMP1-207ENST00000539047 NKPD1Q17RQ9 610 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 KRT74Q7RTS7 529 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 TMEM171Q8WVE6 324 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 TNFAIP8L1Q8WVP5 186 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
VAMP1-207ENST00000539047 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 PIK3IP1Q96FE7 263 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 RNF170Q96K19 258 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 CMTM3Q96MX0 182 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 CST11Q9H112 138 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 CNTD2Q9H8S5 307 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 PCDHB16Q9NRJ7 776 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 HIVEP3Q5T1R4 2406 aa13.2□□□□□ -0.3
VAMP1-207ENST00000539047 SPENQ96T58 3664 aaKnown RBP13.19□□□□□ -0.3
VAMP1-207ENST00000539047 NAV2Q8IVL1 2488 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 HPGDSO60760 199 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 APOA1P02647 267 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 TMEM225BP0DP42 221 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 THBS2P35442 1172 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 POU3F4P49335 361 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 ART1P52961 327 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 CLDN12P56749 244 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 GPR176Q14439 515 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 ZNF846Q147U1 533 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 ZNF573Q86YE8 665 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 OR5P3Q8WZ94 311 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 DIRAS2Q96HU8 199 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 WDFY2Q96P53 400 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 SYT3Q9BQG1 590 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 PLK3Q9H4B4 646 aa13.19□□□□□ -0.3
VAMP1-207ENST00000539047 ELL3Q9HB65 397 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-207ENST00000539047 RELNP78509 3460 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 PQLC2LA1A4F0 135 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 ZNF732B4DXR9 585 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 CLDN25C9JDP6 229 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 CTDSP2O14595 271 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 SCGNO76038 276 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 GOSR1O95249 250 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 CD37P11049 281 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 TNFSF4P23510 183 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 PTGFRP43088 359 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 OR3A4PP47883 348 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 GPM6AP51674 278 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 RSU1Q15404 277 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 BAIAP2L2Q6UXY1 529 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 OR2W3Q7Z3T1 314 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 OR51D1Q8NGF3 324 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 OR4D6Q8NGJ1 314 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 OR5D18Q8NGL1 313 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 ITPKCQ96DU7 683 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 CXXC4Q9H2H0 198 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 TAAR3PQ9P1P4 343 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 RABL2AQ9UBK7 228 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-207ENST00000539047 ING4Q9UNL4 249 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 RABL2BQ9UNT1 228 aa13.18□□□□□ -0.3
VAMP1-207ENST00000539047 KLF2Q9Y5W3 355 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-207ENST00000539047 IGLV3-9A0A075B6K5 115 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 A0A0B4J203 849 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 ZNF780AO75290 641 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-207ENST00000539047 KDM4BO94953 1096 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 PAHP00439 452 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 PLATP00750 562 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 CSTBP04080 98 aaKnown RBP13.17□□□□□ -0.3
VAMP1-207ENST00000539047 ZNF45Q02386 682 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 FAM166AQ6J272 317 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 GLIPR1L1Q6UWM5 242 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 MKXQ8IYA7 352 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 ZSCAN4Q8NAM6 433 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-207ENST00000539047 KCNG3Q8TAE7 436 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms