RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ZFP82Q8N141 532 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SVBPQ8N300 66 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 GATSQ8NAP1 163 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 HSD17B11Q8NBQ5 300 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 AQP11Q8NBQ7 271 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 OR2M7Q8NG81 312 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 OR5B17Q8NGF7 314 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 OR5L2Q8NGL0 311 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 OR1B1Q8NGR6 318 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 OR13D1Q8NGV5 346 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 DYNC2LI1Q8TCX1 351 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 BADQ92934 168 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CNN2Q99439 309 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 PHB2Q99623 299 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SRRQ9GZT4 340 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 MDFICQ9P1T7 246 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 NUFIP1Q9UHK0 495 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 GNG8Q9UK08 70 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SLC7A11Q9UPY5 501 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 MRPS18BQ9Y676 258 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 FLT4P35916 1363 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 DDX60Q8IY21 1712 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 FER1L5A0AVI2 2057 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 A0A1B0GUS0 222 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 C15orf61A6NNL5 157 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 K7ERI5 159 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 PRKAB2O43741 272 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 RAMP3O60896 148 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 ZMPSTE24O75844 475 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 C6orf47O95873 294 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 IGF2P01344 180 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 APOC3P02656 99 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CRYBA1P05813 215 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 HTR1AP08908 422 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 KITLGP21583 273 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 BCKDHBP21953 392 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CD82P27701 267 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 S100A2P29034 98 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 RPL13AP40429 203 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 PMELP40967 661 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CD200P41217 278 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 TSFMP43897 325 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 RGRP47804 291 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 STK19P49842 368 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 RORCP51449 518 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM33P57088 247 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 KLF3P57682 345 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 DNAJB13P59910 316 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 RPL19P84098 196 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 QPRTQ15274 297 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 UBE2V2Q15819 145 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 ATP6V1FQ16864 119 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 LRRC26Q2I0M4 334 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF404Q494X3 552 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 DMRTC1Q5HYR2 192 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 H3F3CQ6NXT2 135 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 PAQR6Q6TCH4 344 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SLC35D2Q76EJ3 337 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 GRINAQ7Z429 371 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM135Q86UB9 458 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 NAA40Q86UY6 237 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 OR4Q3Q8NH05 313 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 OR5K1Q8NHB7 308 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 TERB2Q8NHR7 220 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 MCFD2Q8NI22 146 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CXorf40AQ8TE69 158 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF431Q8TF32 576 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 FAM222BQ8WU58 562 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 ACOT12Q8WYK0 555 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 LINC00479Q96M42 142 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 ALKBH3Q96Q83 286 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 STACQ99469 402 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SLC6A7Q99884 636 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 VPS25Q9BRG1 176 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 UTP23Q9BRU9 249 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 HEXA-AS1Q9H8Q6 139 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SLCO1B3Q9NPD5 702 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 NLE1Q9NVX2 485 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SIGLEC8Q9NYZ4 499 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CALML5Q9NZT1 146 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 NPIPA1Q9UND3 350 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 MGAMO43451 1857 aa2.9□□□□□ -1.94
CSMD3-210ENST00000534172 PTPRFP10586 1907 aa2.9□□□□□ -1.94
CSMD3-210ENST00000534172 MYH9P35579 1960 aaKnown RBP2.9□□□□□ -1.94
CSMD3-210ENST00000534172 ZSWIM8A7E2V4 1837 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 NPIPA5A0A0B4J1W7 369 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 A0A1W2PQL4 384 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 NPIPA5E9PKD4 350 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SLC16A4O15374 487 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TPST1O60507 370 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 CEACAM4O75871 244 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR2J2O76002 312 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM50AO95807 157 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 IGHV2-5P01817 119 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 C8GP07360 202 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TSPAN19P0C672 248 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 RD3LP0DJH9 198 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 GABRA1P14867 456 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SAA4P35542 130 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MAGEA3P43357 314 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms