RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 N6AMT1Q9Y5N5 214 aa7.35□□□□□ -1.23
USP46-207ENST00000508499 PMF1-BGLAPU3KQ54 211 aa7.35□□□□□ -1.23
USP46-207ENST00000508499 APCP25054 2843 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 DYSFO75923 2080 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 IGKV1-9A0A0C4DH69 117 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 PNMA8CA0A1B0GUJ8 204 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 SMIM31A0A1B0GVY4 71 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 A0A1W2PPW3 197 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 PQLC2LA1A4F0 135 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 TRIM64BA6NI03 449 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 ZSCAN5BA6NJL1 495 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 IFNL4K9M1U5 179 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 IGHV1-46P01743 117 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 ATF1P18846 271 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 TNFRSF1AP19438 455 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 RAB3AP20336 220 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 TNFSF4P23510 183 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 GADD45AP24522 165 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 MPZP25189 248 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 COL8A1P27658 744 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 GNALP38405 381 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 ALDH3B1P43353 468 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 MTNR1BP49286 362 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 GNG3P63215 75 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 PRDX4Q13162 271 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 RIN1Q13671 783 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 CTF1Q16619 201 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 NKPD1Q17RQ9 610 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 HSD17B12Q53GQ0 312 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 LHFPL2Q6ZUX7 228 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 CEACAM19Q7Z692 300 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 TMEM200AQ86VY9 491 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 OR5AS1Q8N127 324 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 OR13C5Q8NGS8 318 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 Q8TCH9 128 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 HPSE2Q8WWQ2 592 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 NEU4Q8WWR8 484 aaPredicted RBP7.34□□□□□ -1.23
USP46-207ENST00000508499 NINJ1Q92982 152 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 TMIGD2Q96BF3 282 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 FOXRED1Q96CU9 486 aaPredicted RBP7.34□□□□□ -1.23
USP46-207ENST00000508499 MBD6Q96DN6 1003 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 TRMT61AQ96FX7 289 aaKnown RBP7.34□□□□□ -1.23
USP46-207ENST00000508499 KCTD7Q96MP8 289 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 UQCC2Q9BRT2 126 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 RTL8AQ9BWD3 113 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 PAPOLGQ9BWT3 736 aaKnown RBP7.34□□□□□ -1.23
USP46-207ENST00000508499 RBM38Q9H0Z9 239 aaKnown RBP7.34□□□□□ -1.23
USP46-207ENST00000508499 PPIL3Q9H2H8 161 aaKnown RBP7.34□□□□□ -1.23
USP46-207ENST00000508499 RHOFQ9HBH0 211 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 NOX4Q9NPH5 578 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 SNTG1Q9NSN8 517 aa7.34□□□□□ -1.23
USP46-207ENST00000508499 TACC2O95359 2948 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 CENPEQ02224 2701 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 LRP5LA4QPB2 252 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 ZNF850A8MQ14 1090 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 AIREO43918 545 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 LMX1BO60663 402 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 CA6P23280 308 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 BDKRB2P30411 391 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 SRP9P49458 86 aaKnown RBP7.33□□□□□ -1.24
USP46-207ENST00000508499 RBP2P50120 134 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 PPP3R1P63098 170 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 MAB21L1Q13394 359 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 OR8G1Q15617 311 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 CRIP3Q6Q6R5 217 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 LRRTM1Q86UE6 522 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 ZNF573Q86YE8 665 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 SAXO1Q8IYX7 474 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 ZSCAN4Q8NAM6 433 aaPredicted RBP7.33□□□□□ -1.24
USP46-207ENST00000508499 BHLHE23Q8NDY6 225 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 OR1M1Q8NGA1 313 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 TMEM203Q969S6 136 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 HIST1H2AAQ96QV6 131 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 MICU1Q9BPX6 476 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 ADAT1Q9BUB4 502 aaKnown RBP7.33□□□□□ -1.24
USP46-207ENST00000508499 PKIBQ9C010 78 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 RAB1BQ9H0U4 201 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 SLITRK2Q9H156 845 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 OR51E2Q9H255 320 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 CXXC4Q9H2H0 198 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 CXorf56Q9H5V9 222 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 METTL17Q9H7H0 456 aaPredicted RBP7.33□□□□□ -1.24
USP46-207ENST00000508499 MSL2Q9HCI7 577 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 TCF7L1Q9HCS4 588 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 MYOZ1Q9NP98 299 aaPredicted RBP7.33□□□□□ -1.24
USP46-207ENST00000508499 FZR1Q9UM11 496 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 SLC7A11Q9UPY5 501 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 LAMP3Q9UQV4 416 aa7.33□□□□□ -1.24
USP46-207ENST00000508499 CACNA1DQ01668 2161 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 TRAV8-7A0A075B6U6 113 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 LOC100289279A0A1B0GTE1 492 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 SLC22A1O15245 554 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 NOS1APO75052 506 aaPredicted RBP7.32□□□□□ -1.24
USP46-207ENST00000508499 IL1AP01583 271 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 NAT2P11245 290 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 AZGP1P25311 298 aaKnown RBP7.32□□□□□ -1.24
USP46-207ENST00000508499 MAGEB1P43366 347 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 SOX2P48431 317 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 CAPZA1P52907 286 aa7.32□□□□□ -1.24
USP46-207ENST00000508499 SCAND1P57086 179 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms