RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SDSLQ96GA7 329 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 HOPXQ9BPY8 73 aaPredicted RBP10.37□□□□□ -0.75
UBR4-213ENST00000483922 YY1AP1Q9H869 796 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 RAB18Q9NP72 206 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 DNAJC27Q9NZQ0 273 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 TCF19Q9Y242 345 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 AP3M1Q9Y2T2 418 aa10.37□□□□□ -0.75
UBR4-213ENST00000483922 A0A1W2PRX2 142 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 NKX6-3A6NJ46 265 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 COX7A1P24310 79 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 DLX6P56179 175 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 BLMHQ13867 455 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 CRMP1Q14194 572 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 TAF13Q15543 124 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 GFOD2Q3B7J2 385 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 LIAT1Q6ZQX7 453 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 ARPINQ7Z6K5 226 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 OR2T4Q8NH00 348 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 OR4Q3Q8NH05 313 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 OR5K1Q8NHB7 308 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 RP9Q8TA86 221 aaKnown RBP10.36□□□□□ -0.75
UBR4-213ENST00000483922 RNF133Q8WVZ7 376 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 RNF170Q96K19 258 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 MICU1Q9BPX6 476 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 ABHD6Q9BV23 337 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 PAPOLGQ9BWT3 736 aaKnown RBP10.36□□□□□ -0.75
UBR4-213ENST00000483922 OR51I2Q9H344 312 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 INPP5EQ9NRR6 644 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 IL20Q9NYY1 176 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 ABCD2Q9UBJ2 740 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 CD300AQ9UGN4 299 aa10.36□□□□□ -0.75
UBR4-213ENST00000483922 DNAH1Q9P2D7 4330 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 TRBV23-1A0A0A0MS06 115 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 CST4P01036 141 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 SPI1P17947 270 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 CD33P20138 364 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 GLRA1P23415 457 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 HOXD3P31249 432 aaPredicted RBP10.35□□□□□ -0.75
UBR4-213ENST00000483922 IL5RAQ01344 420 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 SPIBQ01892 262 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 ZNF273Q14593 569 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 CNN3Q15417 329 aaKnown RBP10.35□□□□□ -0.75
UBR4-213ENST00000483922 C10orf99Q6UWK7 81 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 KRT74Q7RTS7 529 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 RNF148Q8N7C7 305 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 TMEM185AQ8NFB2 350 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 OR4M1Q8NGD0 313 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 OR4C15Q8NGM1 316 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 GNPDA2Q8TDQ7 276 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 PIGCQ92535 297 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 ZNF488Q96MN9 340 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 KCTD14Q9BQ13 255 aaPredicted RBP10.35□□□□□ -0.75
UBR4-213ENST00000483922 BTBD10Q9BSF8 475 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 RTL8AQ9BWD3 113 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 MUC13Q9H3R2 512 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 BRD7Q9NPI1 651 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 KRCC1Q9NPI7 259 aaPredicted RBP10.35□□□□□ -0.75
UBR4-213ENST00000483922 FGFR1OP2Q9NVK5 253 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 MPC1Q9Y5U8 109 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 V9GYQ6 96 aa10.35□□□□□ -0.75
UBR4-213ENST00000483922 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 HMGB1P1B2RPK0 211 aaPredicted RBP10.34□□□□□ -0.75
UBR4-213ENST00000483922 MTRF1O75570 445 aaKnown RBP10.34□□□□□ -0.75
UBR4-213ENST00000483922 GASTP01350 101 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 RRM2P31350 389 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 FMO3P31513 532 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 GNALP38405 381 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 OPRL1P41146 370 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 CEBPDP49716 269 aaPredicted RBP10.34□□□□□ -0.75
UBR4-213ENST00000483922 GPM6AP51674 278 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 SLC25A1P53007 311 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 GRB2P62993 217 aaKnown RBP10.34□□□□□ -0.75
UBR4-213ENST00000483922 EGFEM1PQ0D2K5 195 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 EIF2B1Q14232 305 aaKnown RBP10.34□□□□□ -0.75
UBR4-213ENST00000483922 ZNF770Q6IQ21 691 aaPredicted RBP10.34□□□□□ -0.75
UBR4-213ENST00000483922 ZNF782Q6ZMW2 699 aaPredicted RBP10.34□□□□□ -0.75
UBR4-213ENST00000483922 CSNK2A3Q8NEV1 391 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 OR5AU1Q8NGC0 362 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 OR9Q2Q8NGE9 314 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 PYURFQ96I23 114 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 HEXA-AS1Q9H8Q6 139 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 MED20Q9H944 212 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 CDH10Q9Y6N8 788 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 LYSTQ99698 3801 aa10.34□□□□□ -0.75
UBR4-213ENST00000483922 MEX3AA1L020 520 aaKnown RBP10.33□□□□□ -0.76
UBR4-213ENST00000483922 ANXA2P2A6NMY6 339 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 ODF3BA8MYP8 253 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 SLC22A2O15244 555 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 SLC15A1P46059 708 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 RPL31P62899 125 aaKnown RBP10.33□□□□□ -0.76
UBR4-213ENST00000483922 KRT72Q14CN4 511 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 SSX2Q16385 188 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 HACD2Q6Y1H2 254 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 KCTD8Q6ZWB6 473 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 OR52H1Q8NGJ2 320 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 AQP3Q92482 292 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 PRSS22Q9GZN4 317 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 OR10A2Q9H208 303 aa10.33□□□□□ -0.76
UBR4-213ENST00000483922 GORASP2Q9H8Y8 452 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms