RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 KLHL41O60662 606 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SURF6O75683 361 aaKnown RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 MT-CO2P00403 227 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 IGKV1D-33P01593 117 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 IGKV1-33P01594 117 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CA3P07451 260 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CTSLP07711 333 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CTLA4P16410 223 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CD36P16671 472 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 NCF2P19878 526 aaPredicted RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CRABP2P29373 138 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TSPOP30536 169 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 NUP62P37198 522 aaPredicted RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 P2RY1P47900 373 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 PLA2G16P53816 162 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 GFERP55789 205 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 VSX2P58304 361 aaPredicted RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 NUCB1Q02818 461 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 RELAQ04206 551 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 GABPB1Q06547 395 aaPredicted RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ARHGAP19Q14CB8 494 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 INAQ16352 499 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TNXAQ16473 311 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 MOGQ16653 247 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 KCTD21Q4G0X4 260 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TTMPQ5BVD1 217 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ZNF678Q5SXM1 525 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 NIPAL3Q6P499 406 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TRIM40Q6P9F5 258 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SOSTDC1Q6X4U4 206 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ACOT1Q86TX2 421 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 GKN2Q86XP6 184 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ERO1BQ86YB8 467 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SLC35F6Q8N357 371 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 KIF2BQ8N4N8 673 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 Q8N814 137 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ZDHHC22Q8N966 263 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 PLPP5Q8NEB5 264 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 OR51L1Q8NGJ5 315 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 OR2K2Q8NGT1 345 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 OR52N1Q8NH53 320 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 OR4C6Q8NH72 309 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SGMS2Q8NHU3 365 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 APH1BQ8WW43 257 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ITLN2Q8WWU7 325 aaPredicted RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 MBD3L1Q8WWY6 194 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ASB13Q8WXK3 278 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SNX21Q969T3 373 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 UBE2WQ96B02 151 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 DDIT4LQ96D03 193 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CAPZA3Q96KX2 299 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SPATA13Q96N96 652 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 QKIQ96PU8 341 aaKnown RBP eCLIP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TUBGCP2Q9BSJ2 902 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TCHPQ9BT92 498 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 MS4A8Q9BY19 250 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TM6SF2Q9BZW4 377 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 IL22Q9GZX6 179 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CST9LQ9H4G1 147 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TRABDQ9H4I3 376 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 PLEKHF2Q9H8W4 249 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ZWILCHQ9H900 591 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 LRRC40Q9H9A6 602 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 ANKHQ9HCJ1 492 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SLC17A5Q9NRA2 495 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 FARSAQ9Y285 508 aaKnown RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CAB39Q9Y376 341 aaPredicted RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 TRAPPC1Q9Y5R8 145 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CEP170Q5SW79 1584 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 C2CD3Q4AC94 2353 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 DNAH3Q8TD57 4116 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CSPG4Q6UVK1 2322 aa-0.89□□□□□ -2.55
CALD1-218ENST00000478075 SNRNP200O75643 2136 aaKnown RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 PHRF1Q9P1Y6 1649 aaKnown RBP-0.89□□□□□ -2.55
CALD1-218ENST00000478075 CSMD3Q7Z407 3707 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 COL18A1P39060 1754 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 RBBP6Q7Z6E9 1792 aaKnown RBP-0.9□□□□□ -2.55
CALD1-218ENST00000478075 UNC13BO14795 1591 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 ADGRB2O60241 1585 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 MED13LQ71F56 2210 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 LOC102724200A0A096LPH7 203 aaPredicted RBP-0.9□□□□□ -2.55
CALD1-218ENST00000478075 A0A0J9YYE9 177 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 DHRS12A0PJE2 317 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 TRAPPC13A5PLN9 417 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 BTBD17A6NE02 478 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 DPRXA6NFQ7 191 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 RFPL4AA6NLU0 287 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 OR52A4PA6NMU1 304 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 A8MWL6 223 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 CLDN25C9JDP6 229 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 NDUFC2-KCTD14E9PQ53 114 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 RFPL4AL1F8VTS6 287 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 SDHDO14521 159 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 ZBTB5O15062 677 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 CLOCKO15516 846 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 RNF113AO15541 343 aaKnown RBP-0.9□□□□□ -2.55
CALD1-218ENST00000478075 TOM1O60784 492 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 FCN3O75636 299 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 CIAO1O76071 339 aa-0.9□□□□□ -2.55
CALD1-218ENST00000478075 IGHV2-5P01817 119 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms