RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 GCM1Q9NP62 436 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 NDUFB11Q9NX14 153 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 SLC7A11Q9UPY5 501 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 PPP1R3CQ9UQK1 317 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 SF3B6Q9Y3B4 125 aaKnown RBP13.53□□□□□ -0.24
GPC1-207ENST00000466624 CCDC168Q8NDH2 2452 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 TRBV5-7A0A0A0MS05 114 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 CCRL2O00421 344 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 GPX5O75715 221 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 LY6HO94772 140 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 INMTO95050 263 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 JUNBP17275 347 aaPredicted RBP13.52□□□□□ -0.25
GPC1-207ENST00000466624 ATF1P18846 271 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 FSTP19883 344 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 GIFP27352 417 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 PSMB9P28065 219 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 THBS2P35442 1172 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 SOX2P48431 317 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 FUT6P51993 359 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 ZNF154Q13106 437 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 SSX1Q16384 188 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 HFEQ30201 348 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 Q5PR19 223 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 ZNF529Q6P280 563 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 CLEC2AQ6UVW9 174 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 UNQ9370/PRO34162Q6UXP9 181 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 WDR86Q86TI4 376 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 KRTAP1-3Q8IUG1 177 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 ZNF525Q8N782 197 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 YIPF5Q969M3 257 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 MUL1Q969V5 352 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 DERL3Q96Q80 235 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 OR14A2Q96R54 314 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 TMED9Q9BVK6 235 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 FGF23Q9GZV9 251 aaPredicted RBP13.52□□□□□ -0.25
GPC1-207ENST00000466624 FN3KRPQ9HA64 309 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 NEK6Q9HC98 313 aa13.52□□□□□ -0.25
GPC1-207ENST00000466624 PQLC2LA1A4F0 135 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 LRP5LA4QPB2 252 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 MAGEA13PA6NCF6 341 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 ZNF732B4DXR9 585 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 SULT1B1O43704 296 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 GALP22466 123 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 PRKACBP22694 351 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 COL8A2P25067 703 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 GPM6AP51674 278 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 TMEM33P57088 247 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 RPS25P62851 125 aaKnown RBP13.51□□□□□ -0.25
GPC1-207ENST00000466624 NEDD8Q15843 81 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 CLEC12BQ2HXU8 276 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 ACSM3Q53FZ2 586 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 PRAMEF6Q5VXH4 476 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 OR13C9Q8NGT0 318 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 PHYHIPQ92561 330 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 FAM168AQ92567 244 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 HPS1Q92902 700 aa13.51□□□□□ -0.25
GPC1-207ENST00000466624 IGKV1-9A0A0C4DH69 117 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 LRRC30A6NM36 301 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 CYSRT1A8MQ03 144 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 CDC14BO60729 498 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 SMIM18P0DKX4 95 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 IGFBP3P17936 291 aaPredicted RBP13.5□□□□□ -0.25
GPC1-207ENST00000466624 RAB3AP20336 220 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 AZGP1P25311 298 aaKnown RBP13.5□□□□□ -0.25
GPC1-207ENST00000466624 CFHR2P36980 270 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 GP2P55259 537 aaKnown RBP13.5□□□□□ -0.25
GPC1-207ENST00000466624 RIN1Q13671 783 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 MPPED2Q15777 294 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 ASPHD2Q6ICH7 369 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 CD200R1LQ6Q8B3 271 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 LHFPL2Q6ZUX7 228 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 MOGAT3Q86VF5 341 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 ZNF573Q86YE8 665 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 C11orf53Q8IXP5 236 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 C1orf87Q8N0U7 546 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 OR11L1Q8NGX0 322 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 C10orf105Q8TEF2 133 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 BORCS8Q96FH0 119 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 MRPS26Q9BYN8 205 aaKnown RBP13.5□□□□□ -0.25
GPC1-207ENST00000466624 OR51I2Q9H344 312 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 TMEM106BQ9NUM4 274 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 CKLFQ9UBR5 152 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 FOXJ3Q9UPW0 622 aa13.5□□□□□ -0.25
GPC1-207ENST00000466624 MYO9AB2RTY4 2548 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 CLDN25C9JDP6 229 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 LYNX1G3V0Z9 82 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 RGS9O75916 674 aaPredicted RBP13.49□□□□□ -0.25
GPC1-207ENST00000466624 FSTL3O95633 263 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 GRPP07492 148 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 LYNX1P0DP58 116 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 PMELP40967 661 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 RBP2P50120 134 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 ATP1B3P54709 279 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 SCCPDHQ8NBX0 429 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 OR10Z1Q8NGY1 313 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 ZNF420Q8TAQ5 688 aaPredicted RBP13.49□□□□□ -0.25
GPC1-207ENST00000466624 CCL17Q92583 94 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 CPNE2Q96FN4 548 aaPredicted RBP13.49□□□□□ -0.25
GPC1-207ENST00000466624 PIMREGQ9BSJ6 248 aa13.49□□□□□ -0.25
GPC1-207ENST00000466624 PKIBQ9C010 78 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms