RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SNRNP40Q96DI7 357 aaKnown RBP6.33□□□□□ -1.4
UBE4B-204ENST00000462658 FBXO17Q96EF6 278 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 C4orf45Q96LM5 186 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 SH3GL3Q99963 347 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 WACQ9BTA9 647 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 COMMD4Q9H0A8 199 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 KCNN2Q9H2S1 579 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 NIPAL2Q9H841 368 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 FBXL3Q9UKT7 428 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 GTF2A1LQ9UNN4 478 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 SLC22A13Q9Y226 551 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 R4GMQ9 66 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 KIAA1549Q9HCM3 1950 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 TMEM269A0A1B0GVZ9 245 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 TMEM212A6NML5 194 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 OR4C45A6NMZ5 311 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 LOC110117498-PIK3R3F6TDL0 507 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SRSF10O75494 262 aaKnown RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SC5DO75845 299 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 GATBO75879 557 aaKnown RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 PNPP00491 289 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 IL1AP01583 271 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 CALRP27797 417 aaKnown RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 HSD11B1P28845 292 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SDC2P34741 201 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 PRKXP51817 358 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 FOXG1P55316 489 aaPredicted RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SH3BGRP55822 239 aaPredicted RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 PCBD1P61457 104 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 RPS11P62280 158 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 GRB2P62993 217 aaKnown RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 MFGE8Q08431 387 aaPredicted RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 KLRB1Q12918 225 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 ODF4Q2M2E3 257 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF260Q3ZCT1 412 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 CCDC92Q53HC0 331 aaPredicted RBP6.32□□□□□ -1.4
UBE4B-204ENST00000462658 YIF1BQ5BJH7 314 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 WDR38Q5JTN6 314 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 ELFN2Q5R3F8 820 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 C1orf185Q5T7R7 199 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 RTL6Q6ICC9 239 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 UNQ9370/PRO34162Q6UXP9 181 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 GFRALQ6UXV0 394 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 CATSPERDQ86XM0 798 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SKA3Q8IX90 412 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 CNEP1R1Q8N9A8 125 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SLX1AQ9BQ83 275 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 MED18Q9BUE0 208 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SLC25A18Q9H1K4 315 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 RNF121Q9H920 327 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SNTG1Q9NSN8 517 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 ASF1BQ9NVP2 202 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 PLEK2Q9NYT0 353 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 MALT1Q9UDY8 824 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 OR52A1Q9UKL2 312 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 TIMM10BQ9Y5J6 103 aa6.32□□□□□ -1.4
UBE4B-204ENST00000462658 SPTA1P02549 2419 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 A0A1W2PPK0 400 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF879B4DU55 563 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 CASKO14936 926 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 SGCEO43556 437 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ARL6IP5O75915 188 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 CRHP06850 196 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PATE4P0C8F1 98 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 SFTPCP11686 197 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF32P17041 273 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 TIMP3P35625 211 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 SOX6P35712 828 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 MAGEB1P43366 347 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 RORCP51449 518 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PSG4Q00888 419 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 GALK2Q01415 458 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 MXD1Q05195 221 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 SCRN3Q0VDG4 424 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ECH1Q13011 328 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 LY6DQ14210 128 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 RAB35Q15286 201 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 Q499Y3 187 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PRR30Q53SZ7 412 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-204ENST00000462658 FAM27D1Q5T7N8 215 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 BCL2L15Q5TBC7 163 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF774Q6NX45 483 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 SLC22A25Q6T423 547 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 TFAP2EQ6VUC0 442 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF704Q6ZNC4 412 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-204ENST00000462658 RDH10Q8IZV5 341 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF283Q8N7M2 679 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 DNAAF1Q8NEP3 725 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 OR6K3Q8NGY3 331 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 FGFBP3Q8TAT2 258 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 GPR148Q8TDV2 347 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 RAB40AQ8WXH6 277 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 RGP1Q92546 391 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PHYHIPQ92561 330 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 SPTSSAQ969W0 71 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 ATF6BQ99941 703 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 OR2H1Q9GZK4 316 aa6.31□□□□□ -1.4
UBE4B-204ENST00000462658 SLIRPQ9GZT3 109 aaKnown RBP6.31□□□□□ -1.4
UBE4B-204ENST00000462658 PBOV1Q9GZY1 135 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms