RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 F13BP05160 661 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 SEC11BP0C7V7 166 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 PGA4P0DJD7 388 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 PGA5P0DJD9 388 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 ZNF28P17035 718 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 NAA10P41227 235 aaPredicted RBP6.98□□□□□ -1.29
SIK3-203ENST00000415541 NR0B2Q15466 257 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 ZNF101Q8IZC7 436 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 CYB561A3Q8NBI2 242 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 GPR148Q8TDV2 347 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 ZMYND19Q96E35 227 aaPredicted RBP6.98□□□□□ -1.29
SIK3-203ENST00000415541 CCDC74BQ96LY2 380 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 CHRNA9Q9UGM1 479 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 MED31Q9Y3C7 131 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 BDP1A6H8Y1 2624 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 A0A1B0GW64 132 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 DHRS7CA6NNS2 312 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 CLDN34H7C241 214 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 MMP7P09237 267 aaPredicted RBP6.98□□□□□ -1.29
SIK3-203ENST00000415541 RPL12P30050 165 aaKnown RBP6.98□□□□□ -1.29
SIK3-203ENST00000415541 ID4P47928 161 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 GABRA4P48169 554 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 LEG1Q6P5S2 330 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 ZNF429Q86V71 674 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 SLC22A18ASQ8N1D0 253 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 OR51F2Q8NH61 342 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 TMEM255BQ8WV15 326 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 TECTBQ96PL2 329 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 DIRC2Q96SL1 478 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 ADOQ96SZ5 270 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 FAAP24Q9BTP7 215 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 G6PC3Q9BUM1 346 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 FKBP11Q9NYL4 201 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 LRFN1Q9P244 771 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 VSIG4Q9Y279 399 aa6.98□□□□□ -1.29
SIK3-203ENST00000415541 BHLHE40O14503 412 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 GEMIN2O14893 280 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 KLF4O43474 513 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 TBX19O60806 448 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 BMI1P35226 326 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 PDX1P52945 283 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 SOX8P57073 446 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 DUSP5Q16690 384 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 HIKESHIQ53FT3 197 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 DCST2Q5T1A1 773 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 ZNF343Q6P1L6 599 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 TMPPEQ6ZT21 453 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 ZNF100Q8IYN0 542 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 ZNF676Q8N7Q3 588 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 OR13C9Q8NGT0 318 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 OR6K6Q8NGW6 343 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 STT3BQ8TCJ2 826 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 DAZLQ92904 295 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 FAM3DQ96BQ1 224 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 WDR34Q96EX3 536 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 OR2A5Q96R48 311 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 TP53RKQ96S44 253 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 SLC6A7Q99884 636 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 ELOVL1Q9BW60 279 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 PARP12Q9H0J9 701 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 SLC2A8Q9NY64 477 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 SEMA5BQ9P283 1151 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 SLC7A7Q9UM01 511 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 C5orf42Q9H799 3197 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 A0A0A6YYH2 397 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 IGKV1-8A0A0C4DH67 115 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 XKRY2A2RUG3 117 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 MSGN1A6NI15 193 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 A6NJ64 397 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 SOX1O00570 391 aaPredicted RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 XKRYO14609 159 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 PDGFBP01127 241 aaPredicted RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 JMJD7P0C870 316 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 LYL1P12980 280 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 FCGR2CP31995 323 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 GALNSP34059 522 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 GRK6P43250 576 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 RAB35Q15286 201 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 FAM189A2Q15884 450 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 EXOSC6Q5RKV6 272 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 RNASE8Q8TDE3 154 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 ABHD5Q8WTS1 349 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 CCDC74AQ96AQ1 378 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 ACY3Q96HD9 319 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 RCC1LQ96I51 464 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 WWTR1Q9GZV5 400 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 MKKSQ9NPJ1 570 aaPredicted RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 FOXJ2Q9P0K8 574 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 USP36Q9P275 1121 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 ZNF346Q9UL40 294 aaKnown RBP6.97□□□□□ -1.29
SIK3-203ENST00000415541 KCNE3Q9Y6H6 103 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 A0A0A6YYD5 115 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 NDUFS8O00217 210 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 PEX12O00623 359 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 PIAS2O75928 621 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 GYPBP06028 91 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 DANCRP0C864 163 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 PGA3P0DJD8 388 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 OR5H8P0DN80 308 aa6.97□□□□□ -1.29
SIK3-203ENST00000415541 PEBP1P30086 187 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms