RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CACNG6Q9BXT2 260 aa13.47□□□□□ -0.25
SHMT2-202ENST00000414700 ACTR6Q9GZN1 396 aa13.47□□□□□ -0.25
SHMT2-202ENST00000414700 SLC17A5Q9NRA2 495 aa13.47□□□□□ -0.25
SHMT2-202ENST00000414700 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-202ENST00000414700 M0R135 149 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 UBL3O95164 117 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 PSMB1P20618 241 aaKnown RBP13.46□□□□□ -0.25
SHMT2-202ENST00000414700 GIFP27352 417 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 SLC6A9P48067 706 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 SRP9P49458 86 aaKnown RBP13.46□□□□□ -0.25
SHMT2-202ENST00000414700 UBE2NP61088 152 aaKnown RBP13.46□□□□□ -0.25
SHMT2-202ENST00000414700 RPS11P62280 158 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHMT2-202ENST00000414700 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
SHMT2-202ENST00000414700 FDX2Q6P4F2 183 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 PRSS45Q7RTY3 260 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 ZNF799Q96GE5 643 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 BOD1Q96IK1 185 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 CXorf58Q96LI9 332 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 ZNF275Q9NSD4 429 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-202ENST00000414700 OR52A1Q9UKL2 312 aa13.46□□□□□ -0.25
SHMT2-202ENST00000414700 ZNF98A6NK75 572 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 OR5H1A6NKK0 313 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 RGS9O75916 674 aaPredicted RBP13.46□□□□□ -0.26
SHMT2-202ENST00000414700 NMBP08949 121 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 FGF2P09038 288 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 CCNOP22674 350 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 DCTDP32321 178 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 ARR3P36575 388 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 SEZ6L2Q6UXD5 910 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 TOMM5Q8N4H5 51 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 SAMD12Q8N8I0 201 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 CLRN3Q8NCR9 226 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 OR56B4Q8NH76 319 aa13.46□□□□□ -0.26
SHMT2-202ENST00000414700 METTL17Q9H7H0 456 aaPredicted RBP13.46□□□□□ -0.26
SHMT2-202ENST00000414700 FAM90A27PA6NNH2 459 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 NUPL2O15504 423 aaKnown RBP13.45□□□□□ -0.26
SHMT2-202ENST00000414700 B3GALNT1O75752 331 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 TTRP02766 147 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 HOXC12P31275 282 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 IDH3GP51553 393 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-202ENST00000414700 S100A12P80511 92 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 SNAI3Q3KNW1 292 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 ALKBH2Q6NS38 261 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 FAM57BQ71RH2 274 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 NR2C2APQ86WQ0 139 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 PAQR4Q8N4S7 273 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-202ENST00000414700 OR8B12Q8NGG6 310 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 OR5AK2Q8NH90 309 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 NANOS1Q8WY41 292 aaKnown RBP13.45□□□□□ -0.26
SHMT2-202ENST00000414700 USB1Q9BQ65 265 aaKnown RBP13.45□□□□□ -0.26
SHMT2-202ENST00000414700 SOX7Q9BT81 388 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 PBOV1Q9GZY1 135 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 SPATA2Q9UM82 520 aa13.45□□□□□ -0.26
SHMT2-202ENST00000414700 ARPC4-TTLL3A0A0A6YYG9 625 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 NKX2-6A6NCS4 301 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ANXA2P07355 339 aaKnown RBP13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ZNF14P17017 642 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-202ENST00000414700 CHRNB4P30926 498 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 THBS2P35442 1172 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 HSD17B13Q7Z5P4 300 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-202ENST00000414700 BVESQ8NE79 360 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 OR5T2Q8NGG2 359 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ST8SIA2Q92186 375 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 SPTSSAQ969W0 71 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ABHD1Q96SE0 405 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ANKHD1Q8IWZ3 2542 aaKnown RBP13.44□□□□□ -0.26
SHMT2-202ENST00000414700 A0A1W2PPK0 400 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 C5orf49A4QMS7 147 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ABCD4O14678 606 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 SERPINA5P05154 406 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 CCR9P51686 369 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ECH1Q13011 328 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 GFOD2Q3B7J2 385 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 C17orf78Q8N4C9 275 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ZNF676Q8N7Q3 588 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 BEST4Q8NFU0 473 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ABHD4Q8TB40 342 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 YIPF5Q969M3 257 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 POM121L2Q96KW2 1035 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 ZNF281Q9Y2X9 895 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 SLC25A15Q9Y619 301 aa13.44□□□□□ -0.26
SHMT2-202ENST00000414700 TMEM212A6NML5 194 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 PYCARD-AS1I3L0S3 204 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 L7N2F9 121 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 AIPO00170 330 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 P2RY10O00398 339 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 PRAF2O60831 178 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 SC5DO75845 299 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 IGKV3-15P01624 115 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 FCER2P06734 321 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 LPLP06858 475 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 GRNP28799 593 aaKnown RBP13.43□□□□□ -0.26
SHMT2-202ENST00000414700 CCR6P51684 374 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 PLP2Q04941 152 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 SNTB1Q13884 538 aaKnown RBP13.43□□□□□ -0.26
SHMT2-202ENST00000414700 HAVCR2Q8TDQ0 301 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 SCARB1Q8WTV0 552 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms