RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ZCCHC4Q9H5U6 513 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 TXNL4BQ9NX01 149 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 PMF1-BGLAPU3KQ54 211 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 TACC2O95359 2948 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 DYSFO75923 2080 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 IGKV1-27A0A075B6S5 117 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 DHRS7CA6NNS2 312 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 SLC22A1O15245 554 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 SERPINA3P01011 423 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 HCKP08631 526 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 ATF1P18846 271 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 AZGP1P25311 298 aaKnown RBP11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 PPOXP50336 477 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 GMFBP60983 142 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 LSAMPQ13449 338 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 HSD17B12Q53GQ0 312 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 ANGPTL5Q86XS5 388 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 OR1M1Q8NGA1 313 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 OR5D18Q8NGL1 313 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 OR5D14Q8NGL3 314 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 IGFBPL1Q8WX77 278 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 PERPQ96FX8 193 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 MEGF10Q96KG7 1140 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 HIST1H2AAQ96QV6 131 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 MS4A5Q9H3V2 200 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 CYSLTR2Q9NS75 346 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 DECR2Q9NUI1 292 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 DCAF16Q9NXF7 216 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 SSR3Q9UNL2 185 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 MPC1Q9Y5U8 109 aa11.96□□□□□ -0.5
CHRNA1-204ENST00000409323 ARID1AO14497 2285 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 TRDV1A0A1B0GX56 115 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 A6NLC8 198 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 OVOL3O00110 214 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 SULT1B1O43704 296 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 AIREO43918 545 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 RAF1P04049 648 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 UCHL1P09936 223 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 TRAM1Q15629 374 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 CEACAM21Q3KPI0 293 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 ZBTB37Q5TC79 503 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 CD200R1LQ6Q8B3 271 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 MOGAT3Q86VF5 341 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 CCDC54Q8NEL0 328 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 OR52N4Q8NGI2 321 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 PP6455Q8WZ26 134 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 LURAP1Q96LR2 239 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 CXXC4Q9H2H0 198 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 CXorf56Q9H5V9 222 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 SAP30LQ9HAJ7 183 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 CGGBP1Q9UFW8 167 aaPredicted RBP11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
CHRNA1-204ENST00000409323 GATBO75879 557 aaKnown RBP11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 IGFBP3P17936 291 aaPredicted RBP11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 ADRA2CP18825 462 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 RAB3AP20336 220 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 MAPK3P27361 379 aaPredicted RBP11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 NCS1P62166 190 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 PPP3R1P63098 170 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 MXD1Q05195 221 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF154Q13106 437 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 CARTPTQ16568 116 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 C10orf35Q96D05 121 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 MICU1Q9BPX6 476 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 RTL8AQ9BWD3 113 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 TCF7L1Q9HCS4 588 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 CKLFQ9UBR5 152 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 SLC7A11Q9UPY5 501 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 AK6Q9Y3D8 172 aaKnown RBP11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 APCP25054 2843 aa11.94□□□□□ -0.5
CHRNA1-204ENST00000409323 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 SPRY1O43609 319 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 NOL3O60936 208 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 RHBDL1O75783 438 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 ZNF205O95201 554 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 BMP4P12644 408 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 SRMP19623 302 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 GALP22466 123 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 TNFSF4P23510 183 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 COL8A2P25067 703 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 HAAOP46952 286 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 POU3F4P49335 361 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 CAV3P56539 151 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 OR10A3P58181 314 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 VBP1P61758 197 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 CNN3Q15417 329 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 TIMM50Q3ZCQ8 353 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 DDI2Q5TDH0 399 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 HAGHLQ6PII5 290 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 CRIP3Q6Q6R5 217 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 LINC00299Q6ZSB3 139 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 UTS2BQ765I0 119 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 CALHM1Q8IU99 346 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 BOLLQ8N9W6 283 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 C19orf18Q8NEA5 215 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 BORCS8Q96FH0 119 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 TSC22D3Q99576 134 aa11.93□□□□□ -0.5
CHRNA1-204ENST00000409323 SLC22A4Q9H015 551 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms