RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 IL15RAQ13261 267 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 SHHQ15465 462 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 PNLIPRP3Q17RR3 467 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 EIF2S3LQ2VIR3 472 aaKnown RBP18.45■□□□□ 0.54
CTCF-202ENST00000401394 IL34Q6ZMJ4 242 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 ZNF283Q8N7M2 679 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 UQCC2Q9BRT2 126 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 WFDC1Q9HC57 220 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 KLHL13Q9P2N7 655 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 GHRLQ9UBU3 117 aa18.45■□□□□ 0.54
CTCF-202ENST00000401394 PQLC2LA1A4F0 135 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 RNF4P78317 190 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 LRRC18Q8N456 261 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 ZNF2Q9BSG1 426 aaPredicted RBP18.44■□□□□ 0.54
CTCF-202ENST00000401394 SHISA7A6NL88 538 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 LAP3P28838 519 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 ARL4DP49703 201 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 CLRN1P58418 232 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 CYCSP99999 105 aaKnown RBP18.44■□□□□ 0.54
CTCF-202ENST00000401394 SMCO1Q147U7 214 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 NCMAPQ5T1S8 102 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 ZNF529Q6P280 563 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 SLC38A9Q8NBW4 561 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 LYZL4Q96KX0 146 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 GPHA2Q96T91 129 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 FBXO7Q9Y3I1 522 aa18.44■□□□□ 0.54
CTCF-202ENST00000401394 K7EPK0 472 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 FABP1P07148 127 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 FBLP22087 321 aaKnown RBP18.43■□□□□ 0.54
CTCF-202ENST00000401394 SLC6A9P48067 706 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 CHAF1BQ13112 559 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 FAM71E2Q8N5Q1 922 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 BCL2L14Q9BZR8 327 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 SPACA1Q9HBV2 294 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 TLCD2A6NGC4 264 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 FPR2P25090 351 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 DAP3P51398 398 aaKnown RBP18.43■□□□□ 0.54
CTCF-202ENST00000401394 TAS2R31P59538 309 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 UBE2V2Q15819 145 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 LHFPL1Q86WI0 220 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 OR10A2Q9H208 303 aa18.43■□□□□ 0.54
CTCF-202ENST00000401394 URB1O60287 2271 aaKnown RBP18.43■□□□□ 0.54
CTCF-202ENST00000401394 IGHV3-15A0A0B4J1V0 119 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 C7orf77A4D0Y5 90 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 LIPT2A6NK58 231 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 OR13C7P0DN81 318 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 FXYD4P59646 89 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 KISS1Q15726 138 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 VAX1Q5SQQ9 334 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 HSD17B11Q8NBQ5 300 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 KCNG3Q8TAE7 436 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 JSRP1Q96MG2 331 aaPredicted RBP18.42■□□□□ 0.54
CTCF-202ENST00000401394 DZANK1Q9NVP4 752 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 CCDC163A0A0D9SF12 145 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 A0A1W2PQD3 144 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 MASP2O00187 686 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 PNLIPP16233 465 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 PTAFRP25105 342 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 DNM1P34Q6PK57 102 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 PEG10Q86TG7 708 aaKnown RBP18.42■□□□□ 0.54
CTCF-202ENST00000401394 OR5B2Q96R09 309 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 EIF5A2Q9GZV4 153 aaKnown RBP18.42■□□□□ 0.54
CTCF-202ENST00000401394 A0A1W2PPC4 97 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 S100A6P06703 90 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 ACKR3P25106 362 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 ITGA3P26006 1051 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 CEBPGP53567 150 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 CHRFAM7AQ494W8 412 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 TMEM268Q5VZI3 342 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 GGNBP1Q5YKI7 109 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 CDPF1Q6NVV7 123 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 ZNF441Q8N8Z8 693 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 OR2AJ1Q8NGZ0 328 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 KLRF1Q9NZS2 232 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 WIF1Q9Y5W5 379 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 ASPMQ8IZT6 3477 aa18.42■□□□□ 0.54
CTCF-202ENST00000401394 OR5H15A6NDH6 313 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 C5orf52A6NGY3 159 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 A6NIZ1 184 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 FASLGP48023 281 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 RAP1BP61224 184 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 RAP1AP62834 184 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 ECH1Q13011 328 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 ARRDC1Q8N5I2 433 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 AKR7LQ8NHP1 331 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 ABHD14AQ9BUJ0 271 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 CNTNAP3Q9BZ76 1288 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 QDPRP09417 244 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 GABREP78334 506 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 NHLH2Q02577 135 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 PHLDA2Q53GA4 152 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 CD300LFQ8TDQ1 290 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 PECRQ9BY49 303 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 MRPL13Q9BYD1 178 aaKnown RBP18.41■□□□□ 0.54
CTCF-202ENST00000401394 PNRC2Q9NPJ4 139 aaKnown RBP18.41■□□□□ 0.54
CTCF-202ENST00000401394 B3GALT5Q9Y2C3 310 aa18.41■□□□□ 0.54
CTCF-202ENST00000401394 FCGR2AP12318 317 aa18.4■□□□□ 0.54
CTCF-202ENST00000401394 SULT1A2P50226 295 aa18.4■□□□□ 0.54
CTCF-202ENST00000401394 RAB5BP61020 215 aa18.4■□□□□ 0.54
CTCF-202ENST00000401394 Q7L0L9 218 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms