RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CHAF1BQ13112 559 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 GFI1BQ5VTD9 330 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 FAM180AQ6UWF9 173 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 PLXDC2Q6UX71 529 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 P4HA3Q7Z4N8 544 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 HDHD3Q9BSH5 251 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF700Q9H0M5 742 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 C8orf33Q9H7E9 229 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-203ENST00000396547 FAM212BQ9NTI7 297 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-203ENST00000396547 VPS13AQ96RL7 3174 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 PLRG1O43660 514 aaKnown RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 IFNA21P01568 189 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 FBP1P09467 338 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 HIST1H1DP16402 221 aaKnown RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 FSTP19883 344 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 COL9A1P20849 921 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 CRABP1P29762 137 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 RAB5CP51148 216 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 RAP1AP62834 184 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF124Q15973 351 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 SGCBQ16585 318 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 TMEM196Q5HYL7 178 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 SOHLH1Q5JUK2 328 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 SSX9Q7RTT3 188 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 PARP11Q9NR21 331 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 MUC22E2RYF6 1773 aaPredicted RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 RAMP1O60894 148 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 JTBO76095 146 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 BPNT1O95861 308 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 GABRR1P24046 479 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 PTGER4P35408 488 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 SNCAP37840 140 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 TSPAN7P41732 249 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 SLC6A9P48067 706 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 PRSS12P56730 875 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 NHLH2Q02577 135 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 HAGHQ16775 308 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 Q3ZCU0 254 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 CPEB2Q7Z5Q1 589 aaKnown RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF519Q8TB69 540 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 ADAMTS18Q8TE60 1221 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 MR1Q95460 341 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF2Q9BSG1 426 aaPredicted RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF107Q9UII5 783 aaPredicted RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 B3GALT5Q9Y2C3 310 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 FAM221AA4D161 298 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 CDRT15L2A8MXV6 281 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 PLPP3O14495 311 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 GATCO43716 136 aaKnown RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 CDC14BO60729 498 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 IGHV2-5P01817 119 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 HOXA6P31267 233 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 OPRM1P35372 400 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF84P51523 738 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 PLCXD2Q0VAA5 305 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 FUT7Q11130 342 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 PHLDA2Q53GA4 152 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 GGNBP1Q5YKI7 109 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 MYO7BQ6PIF6 2116 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 C1QL2Q7Z5L3 287 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 SUMF2Q8NBJ7 301 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 C11orf40Q8WZ69 217 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 LIN37Q96GY3 246 aaPredicted RBP8.69□□□□□ -1.02
TRIM39-203ENST00000396547 SHDQ96IW2 340 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 EGLN1Q9GZT9 426 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 GPR84Q9NQS5 396 aa8.69□□□□□ -1.02
TRIM39-203ENST00000396547 NXPH3O95157 252 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 KLF8O95600 359 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 IL33O95760 270 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 CD63P08962 238 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 PGCP20142 388 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 KLK2P20151 261 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 MDKP21741 143 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 ANOS1P23352 680 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 FPR2P25090 351 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 TAGLN2P37802 199 aaKnown RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 CSNK1EP49674 416 aaKnown RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 BIDP55957 195 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 AADACL3Q5VUY0 350 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 SULF2Q8IWU5 870 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 C19orf47Q8N9M1 422 aaKnown RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 SUMF1Q8NBK3 374 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 OR13H1Q8NG92 308 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 LIPHQ8WWY8 451 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 HOXB13Q92826 284 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 SCARF2Q96GP6 870 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 MARS2Q96GW9 593 aaKnown RBP8.68□□□□□ -1.02
TRIM39-203ENST00000396547 TGM7Q96PF1 710 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 ABHD14AQ9BUJ0 271 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 SUCNR1Q9BXA5 334 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 GPR61Q9BZJ8 451 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 ADAM19Q9H013 955 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 SDHAF3Q9NRP4 125 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 C19orf12Q9NSK7 152 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 DOK5Q9P104 306 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 LUZP4Q9P127 313 aa8.68□□□□□ -1.02
TRIM39-203ENST00000396547 IGKV1D-8A0A087WSZ0 117 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms