RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 NDUFB7P17568 137 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 P2RY4P51582 365 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 RHEBQ15382 184 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 C4orf17Q53FE4 359 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 FAM69BQ5VUD6 431 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 RNF144BQ7Z419 303 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 FNDC9Q8TBE3 224 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 SCGB3A2Q96PL1 93 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 PBDC1Q9BVG4 233 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 SLC2A4RGQ9NR83 387 aa17.38■□□□□ 0.37
TRIM58-201ENST00000366481 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 PPP1R2P9O14990 202 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 IFNA21P01568 189 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 SLC6A9P48067 706 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 GABRA4P48169 554 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 NKX6-1P78426 367 aaPredicted RBP17.37■□□□□ 0.37
TRIM58-201ENST00000366481 CATSPERDQ86XM0 798 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 OR5B2Q96R09 309 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 ZNF700Q9H0M5 742 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 ZNF701Q9NV72 531 aaPredicted RBP17.37■□□□□ 0.37
TRIM58-201ENST00000366481 C14orf166Q9Y224 244 aaKnown RBP17.37■□□□□ 0.37
TRIM58-201ENST00000366481 SOCS1O15524 211 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 SLC2A1P11166 492 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 RPL27P61353 136 aaKnown RBP17.37■□□□□ 0.37
TRIM58-201ENST00000366481 GLO1Q04760 184 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 RAB30Q15771 203 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 EMC4Q5J8M3 183 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 MAMDC2Q7Z304 686 aaPredicted RBP17.37■□□□□ 0.37
TRIM58-201ENST00000366481 TMEM230Q96A57 120 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 MARS2Q96GW9 593 aaKnown RBP17.37■□□□□ 0.37
TRIM58-201ENST00000366481 C14orf144Q96I85 54 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 SLC46A1Q96NT5 459 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 GPR61Q9BZJ8 451 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 DNAJB11Q9UBS4 358 aa17.37■□□□□ 0.37
TRIM58-201ENST00000366481 PHF3Q92576 2039 aaKnown RBP17.37■□□□□ 0.37
TRIM58-201ENST00000366481 TRAV36DV7A0A075B6V5 113 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 A0A087X0M5 115 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 A0A1B0GX30 115 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 TSTD3H0UI37 97 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 CRTAPO75718 401 aaPredicted RBP17.36■□□□□ 0.37
TRIM58-201ENST00000366481 FOLR1P15328 257 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 ZNF20P17024 532 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 PAX6P26367 422 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 CHATP28329 748 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 TAGLN2P37802 199 aaKnown RBP17.36■□□□□ 0.37
TRIM58-201ENST00000366481 ASCL1P50553 236 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 GAMTQ14353 236 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 SURF2Q15527 256 aaPredicted RBP17.36■□□□□ 0.37
TRIM58-201ENST00000366481 NKAIN3Q8N8D7 197 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 OR52N5Q8NH56 324 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 MR1Q95460 341 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 ADAM19Q9H013 955 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 GPR132Q9UNW8 380 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 AHCTF1Q8WYP5 2266 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 BORCS7-ASMTA0A0B4J1R7 106 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 PPIHO43447 177 aaKnown RBP17.36■□□□□ 0.37
TRIM58-201ENST00000366481 XRCC2O43543 280 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 HCKP08631 526 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 FABP4P15090 132 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 ZNF93P35789 620 aaPredicted RBP17.36■□□□□ 0.37
TRIM58-201ENST00000366481 SNCAP37840 140 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 CDX1P47902 265 aaPredicted RBP17.36■□□□□ 0.37
TRIM58-201ENST00000366481 C1orf140Q5VVS0 124 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 ZNF343Q6P1L6 599 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 GLIPR1L1Q6UWM5 242 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 SLC22A24Q8N4F4 322 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 OR5D18Q8NGL1 313 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 OR1L3Q8NH93 324 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 TAAR9Q96RI9 348 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 PLA2G2EQ9NZK7 142 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 POMT1Q9Y6A1 747 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 KLHL24Q6TFL4 600 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 DMRTC2Q8IXT2 367 aaPredicted RBP17.36■□□□□ 0.37
TRIM58-201ENST00000366481 DTWD2Q8NBA8 298 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 SLC35B3Q9H1N7 401 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 NELFAQ9H3P2 528 aa17.36■□□□□ 0.37
TRIM58-201ENST00000366481 BTBD17A6NE02 478 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 HOXA5P20719 270 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 DHPSP49366 369 aaPredicted RBP17.35■□□□□ 0.37
TRIM58-201ENST00000366481 POLR1DQ9Y2S0 133 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 R4GMQ9 66 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 PRRC2CQ9Y520 2896 aaKnown RBP17.35■□□□□ 0.37
TRIM58-201ENST00000366481 A0A1W2PP11 408 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 DIRAS3O95661 229 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 RBP2P50120 134 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 FBXW4P57775 412 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 TEX30Q5JUR7 227 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 GFI1BQ5VTD9 330 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 GKN2Q86XP6 184 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 NPRL2Q8WTW4 380 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 FOXQ1Q9C009 403 aa17.35■□□□□ 0.37
TRIM58-201ENST00000366481 ZNF726A6NNF4 738 aa17.34■□□□□ 0.37
TRIM58-201ENST00000366481 IGKV3-11P04433 115 aa17.34■□□□□ 0.37
TRIM58-201ENST00000366481 UBE2KP61086 200 aa17.34■□□□□ 0.37
TRIM58-201ENST00000366481 FOXK1P85037 733 aa17.34■□□□□ 0.37
TRIM58-201ENST00000366481 POU3F1Q03052 451 aaPredicted RBP17.34■□□□□ 0.37
TRIM58-201ENST00000366481 CHRFAM7AQ494W8 412 aa17.34■□□□□ 0.37
TRIM58-201ENST00000366481 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.34■□□□□ 0.37
TRIM58-201ENST00000366481 TSTD1Q8NFU3 115 aa17.34■□□□□ 0.37
TRIM58-201ENST00000366481 C19orf12Q9NSK7 152 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms