RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TMEM106AQ96A25 262 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 FGGYQ96C11 551 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 TLNRD1Q9H1K6 362 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 AKAP9Q99996 3911 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 TRBV5-5A0A0J9YX44 114 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 CDC14BO60729 498 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 LY6HO94772 140 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 CFHR2P36980 270 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 CARTPTQ16568 116 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 CEP78Q5JTW2 689 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 KCTD8Q6ZWB6 473 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 KRTAP1-3Q8IUG1 177 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 OR51A4Q8NGJ6 313 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 PHYHIPQ92561 330 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 ADAT3Q96EY9 351 aaPredicted RBP15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 Q96MF0 132 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 ZCCHC4Q9H5U6 513 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 POLDIP2Q9Y2S7 368 aa15.13■□□□□ 0.01
SSSCA1-201ENST00000309328 LOC100289279A0A1B0GTE1 492 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 A6NLC8 198 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 ZNF732B4DXR9 585 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 PCMT1P22061 227 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 CPT2P23786 658 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 COL8A2P25067 703 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 MAP2K4P45985 399 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 GPR6P46095 362 aaPredicted RBP15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 GPM6AP51674 278 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 PPP3R1P63098 170 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 ZNF154Q13106 437 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 KCNJ8Q15842 424 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 LHFPL2Q6ZUX7 228 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 MOGAT3Q86VF5 341 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 ZFP41Q8N8Y5 198 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 TSPAN14Q8NG11 270 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 OR10Z1Q8NGY1 313 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 OR10AC1Q8NH08 325 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 RGP1Q92546 391 aaPredicted RBP15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 YIPF5Q969M3 257 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 BORCS8Q96FH0 119 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 GPR173Q9NS66 373 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 RNF7Q9UBF6 113 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 NPTNQ9Y639 398 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 OTOGQ6ZRI0 2925 aa15.12■□□□□ 0.01
SSSCA1-201ENST00000309328 PNMA8CA0A1B0GUJ8 204 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 PQLC2LA1A4F0 135 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 ZNF879B4DU55 563 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 MAGEB3O15480 346 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 PPIHO43447 177 aaKnown RBP15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 SULT1B1O43704 296 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 HEXAP06865 529 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 GRPP07492 148 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 ATF1P18846 271 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 RAB3AP20336 220 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 GABRA5P31644 462 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 NR4A2P43354 598 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 RBP2P50120 134 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 RPS11P62280 158 aaKnown RBP eCLIP15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 LIPKQ5VXJ0 399 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 MUC20Q8N307 709 aaPredicted RBP15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 ZNF671Q8TAW3 534 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 DVL3Q92997 716 aaPredicted RBP15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 OPALINQ96PE5 141 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 PKIBQ9C010 78 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 OR51I2Q9H344 312 aa15.11■□□□□ 0.01
SSSCA1-201ENST00000309328 MYO9AB2RTY4 2548 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 TRIM64BA6NI03 449 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 VWC2LB2RUY7 222 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 TMEM178BH3BS89 294 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 H3BSH0 61 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 GPX5O75715 221 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 FSTP19883 344 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 GALP22466 123 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 THBS2P35442 1172 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 SOX2P48431 317 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 ATP1B3P54709 279 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 UBE2V2Q15819 145 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 ARMCX4Q5H9R4 360 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 TGIF2LYQ8IUE0 185 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 PHC2Q8IXK0 858 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 WFDC11Q8NEX6 87 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 FOXJ3Q9UPW0 622 aa15.1■□□□□ 0.01
SSSCA1-201ENST00000309328 CREBBPQ92793 2442 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 PRRC2AP48634 2157 aaKnown RBP15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 IGHV4-30-2A0A087WSY4 118 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 TRBV5-7A0A0A0MS05 114 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 hCG_1807616A0A1W2PRN6 198 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 A6NIN4 97 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 J3QT63 122 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 CCRL2O00421 344 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 LMX1BO60663 402 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 CYB5AP00167 134 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 ACAA1P09110 424 aaPredicted RBP15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 AZGP1P25311 298 aaKnown RBP15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 PSMB9P28065 219 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 MDH2P40926 338 aaKnown RBP15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 BTG1P62324 171 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 DOC2BQ14184 412 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 SYT6Q5T7P8 510 aaPredicted RBP15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 PRAMEF6Q5VXH4 476 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 ZNF529Q6P280 563 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms