RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 KRTAP1-3Q8IUG1 177 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 SERPINA12Q8IW75 414 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 ERGIC1Q969X5 290 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 TMEM106AQ96A25 262 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 TMED9Q9BVK6 235 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 FN3KRPQ9HA64 309 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 VPS13CQ709C8 3753 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 TRBV5-5A0A0J9YX44 114 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 A6NLC8 198 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 TMEM210A6NLX4 147 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 ZNF732B4DXR9 585 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 PSMB9P28065 219 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 GNG3P63215 75 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 CNN3Q15417 329 aaKnown RBP20.68■□□□□ 0.9
HOXC9-201ENST00000303450 WDR86Q86TI4 376 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 TGIF2LYQ8IUE0 185 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 PARP16Q8N5Y8 322 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 OR1M1Q8NGA1 313 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 OR5D14Q8NGL3 314 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 ZNF420Q8TAQ5 688 aaPredicted RBP20.68■□□□□ 0.9
HOXC9-201ENST00000303450 FGF23Q9GZV9 251 aaPredicted RBP20.68■□□□□ 0.9
HOXC9-201ENST00000303450 AKAP9Q99996 3911 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 RP2O75695 350 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 OCMP0CE72 109 aaPredicted RBP20.68■□□□□ 0.9
HOXC9-201ENST00000303450 ZNF154Q13106 437 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 DNM1P46Q6ZS02 220 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 PHC2Q8IXK0 858 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 NPRL2Q8WTW4 380 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 Q96MF0 132 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 OR14A2Q96R54 314 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 ZCCHC4Q9H5U6 513 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 TMEM106BQ9NUM4 274 aa20.68■□□□□ 0.9
HOXC9-201ENST00000303450 TANC2Q9HCD6 1990 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 LRRC30A6NM36 301 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 IFNL4K9M1U5 179 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 NDUFS8O00217 210 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 TMEM33P57088 247 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 NEDD8Q15843 81 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 WFDC11Q8NEX6 87 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 OR13C9Q8NGT0 318 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 OR11L1Q8NGX0 322 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 TRMT10AQ8TBZ6 339 aaKnown RBP20.67■□□□□ 0.9
HOXC9-201ENST00000303450 C10orf105Q8TEF2 133 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 PIMREGQ9BSJ6 248 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 VCX3AQ9NNX9 186 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 C1orf123Q9NWV4 160 aa20.67■□□□□ 0.9
HOXC9-201ENST00000303450 CREBBPQ92793 2442 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 FAM230AA0A1W2PPH8 454 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 ZNF879B4DU55 563 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 INMTO95050 263 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 IRF2P14316 349 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 ATF1P18846 271 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 FAM76BQ5HYJ3 339 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 Q8TCH9 128 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 THRSPQ92748 146 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 HPS1Q92902 700 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 TMEM203Q969S6 136 aa20.66■□□□□ 0.9
HOXC9-201ENST00000303450 hCG_1807616A0A1W2PRN6 198 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 LRP5LA4QPB2 252 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 CLDN25C9JDP6 229 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 PPIHO43447 177 aaKnown RBP20.65■□□□□ 0.9
HOXC9-201ENST00000303450 PRKACBP22694 351 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 GIFP27352 417 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 MAPK3P27361 379 aaPredicted RBP20.65■□□□□ 0.9
HOXC9-201ENST00000303450 PMELP40967 661 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 FUT6P51993 359 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 HNRNPA0Q13151 305 aaKnown RBP20.65■□□□□ 0.9
HOXC9-201ENST00000303450 RIN1Q13671 783 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 TRAM1Q15629 374 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 BORCS8Q96FH0 119 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 NEK6Q9HC98 313 aa20.65■□□□□ 0.9
HOXC9-201ENST00000303450 IGHV4-30-2A0A087WSY4 118 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 IGKV1-9A0A0C4DH69 117 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 PQLC2LA1A4F0 135 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 CDIPTO14735 213 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 PSMA1P25786 263 aaKnown RBP20.64■□□□□ 0.9
HOXC9-201ENST00000303450 GPR6P46095 362 aaPredicted RBP20.64■□□□□ 0.9
HOXC9-201ENST00000303450 RPS25P62851 125 aaKnown RBP20.64■□□□□ 0.9
HOXC9-201ENST00000303450 ZNF181Q2M3W8 571 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 ACSM3Q53FZ2 586 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 ZNF826PQ6ZT77 177 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 PEG10Q86TG7 708 aaKnown RBP20.64■□□□□ 0.9
HOXC9-201ENST00000303450 RPL3LQ92901 407 aaKnown RBP20.64■□□□□ 0.9
HOXC9-201ENST00000303450 TIMD4Q96H15 378 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 TLNRD1Q9H1K6 362 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 OR51I2Q9H344 312 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 DCAF16Q9NXF7 216 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 TAS2R4Q9NYW5 299 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 CKLFQ9UBR5 152 aa20.64■□□□□ 0.9
HOXC9-201ENST00000303450 A0A1W2PPK0 400 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 SULT1B1O43704 296 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 RAB3AP20336 220 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 AZGP1P25311 298 aaKnown RBP20.63■□□□□ 0.89
HOXC9-201ENST00000303450 GABRA5P31644 462 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 RBMXP38159 391 aaKnown RBP20.63■□□□□ 0.89
HOXC9-201ENST00000303450 SSX1Q16384 188 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 ZNF573Q86YE8 665 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 C11orf53Q8IXP5 236 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 C1orf87Q8N0U7 546 aa20.63■□□□□ 0.89
HOXC9-201ENST00000303450 SCCPDHQ8NBX0 429 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms