RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 C1orf159Q96HA4 380 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 POM121L2Q96KW2 1035 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 ZCCHC4Q9H5U6 513 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 GPR84Q9NQS5 396 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 ZNF275Q9NSD4 429 aaPredicted RBP17.98■□□□□ 0.47
SMCO4-201ENST00000298966 A0A0G2JK05 382 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 A0A1B0GTI1 187 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 ICMTO60725 284 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 DBHP09172 617 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 APOBEC3AP31941 199 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-201ENST00000298966 ETV6P41212 452 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 SOX2P48431 317 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 ODF4Q2M2E3 257 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 PGAP1Q75T13 922 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 COMMD2Q86X83 199 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 SERPINA12Q8IW75 414 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 C1orf174Q8IYL3 243 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 MFSD4AQ8N468 514 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 OR10AC1Q8NH08 325 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 OR51E1Q8TCB6 317 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 PPP1R14AQ96A00 147 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 ZNF75AQ96N20 296 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 WDFY2Q96P53 400 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 PLGRKTQ9HBL7 147 aa17.97■□□□□ 0.47
SMCO4-201ENST00000298966 MGAM2Q2M2H8 2515 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 IGHV4-61A0A0C4DH41 118 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 A0A1W2PR80 420 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 NOTOA8MTQ0 251 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 TBX1O43435 398 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 DHRS3O75911 302 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 IGKV3-15P01624 115 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 SLC2A1P11166 492 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 ZNF14P17017 642 aaPredicted RBP17.96■□□□□ 0.47
SMCO4-201ENST00000298966 TUBG1P23258 451 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 APEX1P27695 318 aaKnown RBP17.96■□□□□ 0.47
SMCO4-201ENST00000298966 DCTN2Q13561 401 aaKnown RBP17.96■□□□□ 0.47
SMCO4-201ENST00000298966 CARTPTQ16568 116 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 NKAIN3Q8N8D7 197 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 OR51A4Q8NGJ6 313 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 OR5L1Q8NGL2 311 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 SLC7A6Q92536 515 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 BORCS5Q969J3 196 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 NOX3Q9HBY0 568 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 TUBG2Q9NRH3 451 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 TBCCD1Q9NVR7 557 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 V9GYS6 101 aa17.96■□□□□ 0.47
SMCO4-201ENST00000298966 A0A1W2PPK0 400 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 ZNF503-AS2A6NEH8 195 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 ZNF20P17024 532 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 SRP14P37108 136 aaKnown RBP17.95■□□□□ 0.46
SMCO4-201ENST00000298966 CAV3P56539 151 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 PPP3R1P63098 170 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 MALLQ13021 153 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 CEP78Q5JTW2 689 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 ZBTB37Q5TC79 503 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 SFXN4Q6P4A7 337 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 MZT2AQ6P582 158 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 NR2C2APQ86WQ0 139 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.95■□□□□ 0.46
SMCO4-201ENST00000298966 WDR31Q8NA23 367 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 SLC30A7Q8NEW0 376 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 OR5D14Q8NGL3 314 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 SPSB4Q96A44 273 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 C1QTNF6Q9BXI9 259 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 PLEKHA1Q9HB21 404 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 PALMDQ9NP74 551 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 CMAHPQ9Y471 501 aa17.95■□□□□ 0.46
SMCO4-201ENST00000298966 MEGF8Q7Z7M0 2845 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 LOC100509620A0A075B734 347 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 C5orf49A4QMS7 147 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 CTDSP2O14595 271 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 NCR1O76036 304 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 ALX3O95076 343 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 ERCC1P07992 297 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-201ENST00000298966 THBS4P35443 961 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 ZNF45Q02386 682 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 DDI2Q5TDH0 399 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 CCDC190Q86UF4 302 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 ZNF584Q8IVC4 421 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 CDH26Q8IXH8 852 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 OR14K1Q8NGZ2 314 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 PP6455Q8WZ26 134 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 FOXRED1Q96CU9 486 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-201ENST00000298966 REEP6Q96HR9 211 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 CDH20Q9HBT6 801 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 NEK6Q9HC98 313 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 MYOZ1Q9NP98 299 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-201ENST00000298966 ZNF319Q9P2F9 582 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 EIF3KQ9UBQ5 218 aaKnown RBP17.94■□□□□ 0.46
SMCO4-201ENST00000298966 N6AMT1Q9Y5N5 214 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 V9GY05 133 aa17.94■□□□□ 0.46
SMCO4-201ENST00000298966 SMIM30A4D0T7 59 aa17.93■□□□□ 0.46
SMCO4-201ENST00000298966 IGLV1-44P01699 117 aa17.93■□□□□ 0.46
SMCO4-201ENST00000298966 IGFBP3P17936 291 aaPredicted RBP17.93■□□□□ 0.46
SMCO4-201ENST00000298966 GNALP38405 381 aa17.93■□□□□ 0.46
SMCO4-201ENST00000298966 MAGEB1P43366 347 aa17.93■□□□□ 0.46
SMCO4-201ENST00000298966 MAP2K3P46734 347 aa17.93■□□□□ 0.46
SMCO4-201ENST00000298966 CAPZA1P52907 286 aa17.93■□□□□ 0.46
SMCO4-201ENST00000298966 SCAND1P57086 179 aa17.93■□□□□ 0.46
SMCO4-201ENST00000298966 SNAI3Q3KNW1 292 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms