RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 4922502D21RikQ8C634 189 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rbmxl1Q91VM5 388 aaKnown RBP15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 DohhQ99LN9 302 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 SktA2AQ25 1946 aaKnown RBP15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc35d1A2AKQ0 355 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Prr36E9PV26 1098 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 1700003H04RikE9PXM2 192 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm20431E9PY39 371 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Pet117P0DJF2 80 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr890Q7TRD9 314 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc6a17Q8BJI1 727 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Zdhhc5Q8VDZ4 715 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1102Q8VES2 324 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr113Q8VEU4 312 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Sectm1aQ921W8 192 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm5771Q792Y9 245 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Kiaa1671Q8BRV5 308 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ykt6Q9CQW1 198 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cep295Q8BQ48 2412 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Daw1D3Z7A5 415 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn2r83E9Q0G7 864 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Adra1aP97718 466 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Trav8d-2Q5R1B6 112 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r37Q8R2E4 302 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Lgi1Q9JIA1 557 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ppm1dQ9QZ67 598 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr267A2AM35 313 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gnb4P29387 340 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gabrb1P50571 474 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 MtfmtQ9D799 386 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 TrilQ9DBY4 809 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr543E9PWI5 336 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr406Q7TRX0 323 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1489Q8VFQ5 313 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fkbp11Q9D1M7 201 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 PigvQ7TPN3 493 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr646Q8VGW2 312 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Bdp1Q571C7 2467 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm19410A0A140LJC7 2098 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fam90a1aA2A4E2 429 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Prdx6O08709 224 aaKnown RBP15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr201Q7TS38 308 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r6Q8R2D4 303 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm5475D3YV11 175 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cyp2d37-psF6YKB5 150 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r31L7N2F1 303 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 P01804 111 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Bcl6P41183 707 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ppp1cbP62141 327 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr193Q7TS43 309 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Asb16Q8VHS5 453 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Q9D7E4 109 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ceacam18Q9D871 376 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Trbv23A0A0A6YWQ1 115 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Pcdh12O55134 1180 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tmem64Q3U145 381 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Trp53rkaQ5U452 244 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fam221aQ8C790 301 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Timd2Q8R183 305 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r87Q8R255 295 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr720Q8VF37 316 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tp53rkQ99PW4 244 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 March9Q3TZ87 348 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Q3U6N9 222 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cramp1Q6PG95 1285 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 A730061H03RikQ8BGD2 154 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Mrpl38Q8K2M0 380 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rfc3Q8R323 356 aaKnown RBP15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Glb1lQ8VC60 646 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 4933400A11RikQ9CR52 288 aa15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rps19Q9CZX8 145 aaKnown RBP15.18■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr568E9Q554 313 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Hoxd4P10628 250 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cdkn2dQ60773 166 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Sim2Q61079 657 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr923Q7TRB9 317 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 PccbQ99MN9 541 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fbxw27A0A1D5RLF0 466 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm10715J3QP74 227 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fut1O09160 376 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 PomcP01193 235 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 PdgfbP31240 241 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Limk1P53668 647 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 NptnP97300 397 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr479Q7TRV1 327 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Nanos1Q80WY3 267 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc26a11Q80ZD3 593 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Q8C4X7 151 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Endod1Q8C522 501 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Q9DAE8 263 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr571E9Q407 322 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Smad6O35182 495 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 EdaO54693 391 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Sod2P09671 222 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Nme1P15532 152 aaKnown RBP15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cyr61P18406 379 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Elk1P41969 429 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 C4bP01029 1738 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr66F8VQ01 311 aa15.17■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rnf150Q5DTZ6 437 aa15.17■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms