RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CXCL12P48061 93 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 LYPD8Q6UX82 237 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 DGAT2L6Q6ZPD8 337 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 ABI3BPQ7Z7G0 1075 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 MMP25Q9NPA2 562 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 LANCL2Q9NS86 450 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 RASL12Q9NYN1 266 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 LPAR3Q9UBY5 353 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 IGHV3-9P01782 118 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 FAHP16930 419 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 GALR1P47211 349 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 C9orf152Q5JTZ5 239 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 NCMAPQ5T1S8 102 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 PWWP2BQ6NUJ5 590 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 TCTEX1D1Q8N7M0 179 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 MORN4Q8NDC4 146 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 MRGPRX4Q96LA9 322 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 NPAS1Q99742 590 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 PRRT4C9JH25 899 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 INHBBP09529 407 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 GLRA1P23415 457 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 C21orf58P58505 322 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 HLA-DRB3P79483 266 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 ARL16Q0P5N6 197 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 PMS2P11Q13670 270 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 FZD2Q14332 565 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 TP53I13Q8NBR0 393 aaPredicted RBP9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF596Q8TC21 504 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 NT5CQ8TCD5 201 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 C11orf40Q8WZ69 217 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 ADGRG7Q96K78 797 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 C1QTNF6Q9BXI9 259 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 MS4A7Q9GZW8 240 aaPredicted RBP9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 FBXO34Q9NWN3 711 aa9.58□□□□□ -0.88
CLTCL1-209ENST00000617103 MYH14Q7Z406 1995 aaKnown RBP9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 FRG2CA6NGY1 282 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 DHHO43323 396 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 GPANK1O95872 356 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 FUT3P21217 361 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 HTRA3P83110 453 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 IL13RA2Q14627 380 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 DEGS2Q6QHC5 323 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 PIK3IP1Q96FE7 263 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 LOXHD1Q8IVV2 1947 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 TRBV5-3A0A0A0MS03 114 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 SIRPB1O00241 398 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 SLC31A2O15432 143 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 NKX2-2O95096 273 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OPN1MWP04001 364 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 CRYBA1P05813 215 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OPN1MW2P0DN77 364 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OPN1MW3P0DN78 364 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 PMCHP20382 165 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 FAM53BQ14153 422 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 KCNAB1Q14722 419 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 TRILQ7L0X0 811 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OR5C1Q8NGR4 320 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 ARHGAP5-AS1Q96IT6 56 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 SPAG17Q6Q759 2223 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 UBE2L5PA0A1B0GUS4 154 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 C7orf66A4D0T2 115 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 IDSB3KWA1 339 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 ARG1P05089 322 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 SHHQ15465 462 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OR8G1Q15617 311 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 ETFDHQ16134 617 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 Q6ZNB5 142 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 C19orf35Q6ZS72 473 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OR5AS1Q8N127 324 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OR2C3Q8N628 320 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 PATE1Q8WXA2 126 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 SPSB1Q96BD6 273 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 ZG16BQ96DA0 208 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 KTI12Q96EK9 354 aaPredicted RBP9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 MVB12AQ96EY5 273 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 USB1Q9BQ65 265 aaKnown RBP9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 C7orf77A4D0Y5 90 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 PRKNO60260 465 aaPredicted RBP9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 CRHP06850 196 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 ADH4P08319 380 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OR5G3P0C626 314 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 CYB561P49447 251 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 FUT6P51993 359 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 TMEM33P57088 247 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 OR8B8Q15620 311 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 THSD4Q6ZMP0 1018 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 ISOC2Q96AB3 205 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 TECTBQ96PL2 329 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 RAB40CQ96S21 281 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 GINS3Q9BRX5 216 aa9.57□□□□□ -0.88
CLTCL1-209ENST00000617103 SHROOM3Q8TF72 1996 aa9.56□□□□□ -0.88
CLTCL1-209ENST00000617103 CXorf51AA0A1B0GTR3 108 aa9.56□□□□□ -0.88
CLTCL1-209ENST00000617103 hCG_1809904A0A1W2PP81 198 aa9.56□□□□□ -0.88
CLTCL1-209ENST00000617103 A0A1W2PR64 198 aa9.56□□□□□ -0.88
CLTCL1-209ENST00000617103 A0A1W2PRV1 198 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms