RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 FAM45AQ8TCE6 357 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 MRAPQ8TCY5 172 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 CD200R1Q8TD46 325 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 HPSE2Q8WWQ2 592 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 HGDQ93099 445 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 ESAMQ96AP7 390 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 C4orf45Q96LM5 186 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 ATG101Q9BSB4 218 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 FUNDC2Q9BWH2 189 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 MND1Q9BWT6 205 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 SLC22A4Q9H015 551 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 RACGAP1Q9H0H5 632 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 SRD5A3Q9H8P0 318 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 NGBQ9NPG2 151 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 BIN3Q9NQY0 253 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 TREX1Q9NSU2 369 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 TAS2R9Q9NYW1 312 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF490Q9ULM2 529 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-214ENST00000572365 ICAM5Q9UMF0 924 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 DHRS7Q9Y394 339 aa4.44□□□□□ -1.7
SF3B3-214ENST00000572365 TRAV6A0A075B6T7 132 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 IGHV3-15A0A0B4J1V0 119 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 TRBV5-5A0A0J9YX44 114 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 LOC390937A0A1W2PQ73 354 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ANKDD1BA6NHY2 528 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 PRSS46E5RG02 174 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 H7C2Y5 167 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 H7C417 338 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 I3L521 148 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 CCL24O00175 119 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 TNFSF11O14788 317 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 HDAC3O15379 428 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 PSMD3O43242 534 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 KRT33AO76009 404 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 NGFP01138 241 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 NPPAP01160 153 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 APRTP07741 180 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ZP3P21754 424 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ANOS1P23352 680 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ATP5A1P25705 553 aaKnown RBP4.43□□□□□ -1.7
SF3B3-214ENST00000572365 PTBP1P26599 531 aaKnown RBP eCLIP4.43□□□□□ -1.7
SF3B3-214ENST00000572365 RAB13P51153 203 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ATP4BP51164 291 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ATP12AP54707 1039 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 MAB21L1Q13394 359 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 NEDD8Q15843 81 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ATP6AP1Q15904 470 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 TTLL9Q3SXZ7 439 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 COQ5Q5HYK3 327 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 CLLU1Q5K131 121 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 SCIMPQ6UWF3 145 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 TMIGD1Q6UXZ0 262 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 GABRG1Q8N1C3 465 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 BPIFB2Q8N4F0 458 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 C10orf53Q8N6V4 93 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 GDPD1Q8N9F7 314 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 OR2L5Q8NG80 312 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 OR4K17Q8NGC6 315 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 OR52B6Q8NGF0 335 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 OR4D10Q8NGI6 311 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 OR10V1Q8NGI7 309 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 NDNFQ8TB73 568 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 DYNC2LI1Q8TCX1 351 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ABHD3Q8WU67 409 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 C1orf54Q8WWF1 131 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 CYGBQ8WWM9 190 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 DEDD2Q8WXF8 326 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 TMBIM1Q969X1 311 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ZHX1-C8orf76Q96EF9 292 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 EPYCQ99645 322 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 KAT8Q9H7Z6 458 aaKnown RBP4.43□□□□□ -1.7
SF3B3-214ENST00000572365 C3orf14Q9HBI5 128 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ABCB10Q9NRK6 738 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 MCUBQ9NWR8 336 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 ADA2Q9NZK5 511 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 BFARQ9NZS9 450 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 SLC17A7Q9P2U7 560 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 KIF25Q9UIL4 384 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 GPR132Q9UNW8 380 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 MOKQ9UQ07 419 aa4.43□□□□□ -1.7
SF3B3-214ENST00000572365 DNAH3Q8TD57 4116 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 A0A075B6Q4 140 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 DHRS12A0PJE2 317 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 NCF1BA6NI72 391 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 PCP4L1A6NKN8 68 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 NCF1CA8MVU1 366 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 TRIM49D1C9J1S8 452 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 BLOC1S5-TXNDC5H3BN57 136 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 AIM2O14862 343 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CTDSPLO15194 276 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 SLC22A5O76082 557 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CDK1P06493 297 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CSF3P09919 207 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 HIST1H2AGP0C0S8 130 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 SMIM6P0DI80 62 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 C1GALT1C1LP0DN25 315 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CPMP14384 443 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 NCF1P14598 390 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 PGCP20142 388 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms