RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CAV3P56539 151 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 DMRTC1Q5HYR2 192 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 DDI2Q5TDH0 399 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 NKAIN3Q8N8D7 197 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 TRMT10AQ8TBZ6 339 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 DVL3Q92997 716 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 SLC25A46Q96AG3 418 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 TECTBQ96PL2 329 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 SLC30A2Q9BRI3 323 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 TMEM204Q9BSN7 226 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 PPP1R3EQ9H7J1 279 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 TMEM138Q9NPI0 162 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 CCDC59Q9P031 241 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 MYEF2Q9P2K5 600 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 SLC7A11Q9UPY5 501 aa13.19□□□□□ -0.3
HERPUD1-219ENST00000570273 USP9YO00507 2555 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 IGLV3-9A0A075B6K5 115 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 IGKV1-9A0A0C4DH69 117 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 A0A0G2JK05 382 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 MEGF11A6BM72 1044 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 IGHV3-13P01766 116 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 PRKACBP22694 351 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 SOX6P35712 828 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 ADIPOQQ15848 244 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 ZNF672Q499Z4 452 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 GLT8D1Q68CQ7 371 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 NR2C2APQ86WQ0 139 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 JAGN1Q8N5M9 183 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 SPSB1Q96BD6 273 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 HIST1H2AAQ96QV6 131 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 GFI1Q99684 422 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 SPOCK3Q9BQ16 436 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 ADAT1Q9BUB4 502 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 PLK3Q9H4B4 646 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 ABCB9Q9NP78 766 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 TAAR3PQ9P1P4 343 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 MPC1Q9Y5U8 109 aa13.18□□□□□ -0.3
HERPUD1-219ENST00000570273 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 A6NNC1 897 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 NOTOA8MTQ0 251 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 ALX3O95076 343 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 CLDN1O95832 211 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 PRF1P14222 555 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 RORCP51449 518 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 PSMD7P51665 324 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 DAZAP2Q15038 168 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 OR8G1Q15617 311 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 DGUOKQ16854 277 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 NKPD1Q17RQ9 610 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 SFXN4Q6P4A7 337 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 KRT74Q7RTS7 529 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 OR8S1Q8NH09 359 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 BORCS8Q96FH0 119 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 SPACA5Q96QH8 159 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 TMEM100Q9NV29 134 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 CISD1Q9NZ45 108 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 CGGBP1Q9UFW8 167 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 V9GY05 133 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 PTPN13Q12923 2485 aa13.17□□□□□ -0.3
HERPUD1-219ENST00000570273 ASH1LQ9NR48 2969 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 FAM230AA0A1W2PPH8 454 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 PLSCR5A0PG75 271 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 MOGQ16653 247 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 HES5Q5TA89 166 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 HPSE2Q8WWQ2 592 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 GTF3AQ92664 365 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 GPER1Q99527 375 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 NKX3-1Q99801 234 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 DHRS9Q9BPW9 319 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 MICU1Q9BPX6 476 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 BARHL1Q9BZE3 327 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 PLGRKTQ9HBL7 147 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 MSL2Q9HCI7 577 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 PTTG2Q9NZH5 202 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 DAPK2Q9UIK4 370 aa13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-219ENST00000570273 DOPEY2Q9Y3R5 2298 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 AIPO00170 330 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 GOSR1O95249 250 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 ALDOBP05062 364 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 SLC2A2P11168 524 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 COX6B1P14854 86 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 SERPINF1P36955 418 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 ALDH3B1P43353 468 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 FUT6P51993 359 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 RAB11BQ15907 218 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 CEACAM21Q3KPI0 293 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 IDNKQ5T6J7 187 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 Q6ZR03 302 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 LHFPL2Q6ZUX7 228 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 CROCCP3Q8IVE0 287 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.3
HERPUD1-219ENST00000570273 OR13G1Q8NGZ3 307 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms