RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 M0R1W7 72 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 TNFRSF11BO00300 401 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 GASTP01350 101 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 OPRL1P41146 370 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 UBE2E1P51965 193 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 CAV3P56539 151 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 GNGT1P63211 74 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 IL5RAQ01344 420 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 PRB3Q04118 309 aaPredicted RBP10.71□□□□□ -0.69
TPM1-220ENST00000559556 SPATS1Q496A3 300 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 NCR3LG1Q68D85 454 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 AQP11Q8NBQ7 271 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 OR2T33Q8NG76 320 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 OR6N2Q8NGY6 317 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 ANGPTL6Q8NI99 470 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 FAM110DQ8TAY7 271 aaPredicted RBP10.71□□□□□ -0.69
TPM1-220ENST00000559556 H1FXQ92522 213 aaKnown RBP10.71□□□□□ -0.69
TPM1-220ENST00000559556 GAFA1Q96PS6 74 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 INTS14Q96SY0 518 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 AMELYQ99218 206 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 ELAC2Q9BQ52 826 aaKnown RBP10.71□□□□□ -0.69
TPM1-220ENST00000559556 RTL8AQ9BWD3 113 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 DGCR6LQ9BY27 220 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 WDR13Q9H1Z4 485 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 RGCCQ9H4X1 137 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 ABCB9Q9NP78 766 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 CMC2Q9NRP2 79 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 ARMC1Q9NVT9 282 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 TENM3Q9P273 2699 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 ZNF319Q9P2F9 582 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 FBLN5Q9UBX5 448 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 MPC1Q9Y5U8 109 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 ANXA2P2A6NMY6 339 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 RIIAD1A6NNX1 92 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 CCNB2O95067 398 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 SOX14O95416 240 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 PAHP00439 452 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 IFNGP01579 166 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 CSF1P09603 554 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 ZNF3P17036 446 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 ACKR3P25106 362 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 DCTDP32321 178 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 GYS2P54840 703 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 PRDX4Q13162 271 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 GFOD2Q3B7J2 385 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 ERI1Q8IV48 349 aaKnown RBP10.7□□□□□ -0.7
TPM1-220ENST00000559556 PNKDQ8N490 385 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 BEND2Q8NDZ0 799 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 OR5T2Q8NGG2 359 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 HPSE2Q8WWQ2 592 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 MED30Q96HR3 178 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 CDRT15Q96T59 188 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 OR10A2Q9H208 303 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 METTL8Q9H825 291 aaKnown RBP10.7□□□□□ -0.7
TPM1-220ENST00000559556 DNAJB11Q9UBS4 358 aa10.7□□□□□ -0.7
TPM1-220ENST00000559556 SLC25A10Q9UBX3 287 aaPredicted RBP10.7□□□□□ -0.7
TPM1-220ENST00000559556 A0A1W2PRD5 423 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 A0A1W2PRF3 423 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 A0A1W2PRM7 423 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 ANKRD61A6NGH8 418 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 SIGLEC5O15389 551 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 CST4P01036 141 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 ACAA1P09110 424 aaPredicted RBP10.69□□□□□ -0.7
TPM1-220ENST00000559556 ATP6V1B2P21281 511 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 GABRA5P31644 462 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 EFNB2P52799 333 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 DGUOKQ16854 277 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 BEAN1Q3B7T3 259 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 KPRPQ5T749 579 aaPredicted RBP10.69□□□□□ -0.7
TPM1-220ENST00000559556 SLC35E4Q6ICL7 350 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 SHFQ7M4L6 423 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 TIGD4Q8IY51 512 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 OR5P3Q8WZ94 311 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 RPL3LQ92901 407 aaKnown RBP10.69□□□□□ -0.7
TPM1-220ENST00000559556 PGAM5Q96HS1 289 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 FGF23Q9GZV9 251 aaPredicted RBP10.69□□□□□ -0.7
TPM1-220ENST00000559556 PPA2Q9H2U2 334 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 MED20Q9H944 212 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 BRD7Q9NPI1 651 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 SNTG1Q9NSN8 517 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 VNN3Q9NY84 501 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 ACTR3BQ9P1U1 418 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 ZNF391Q9UJN7 358 aa10.69□□□□□ -0.7
TPM1-220ENST00000559556 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 FAM183AA6NL82 134 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 OR2AT4A6NND4 320 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 ZNF850A8MQ14 1090 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 H3BUX3 64 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 AKR7A2O43488 359 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 SNX3O60493 162 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 GLCEO94923 617 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 TFF1P04155 84 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 H2BFMP0C1H6 154 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 GSTT1P30711 240 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 GMFBP60983 142 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 PPP1R8Q12972 351 aaKnown RBP10.68□□□□□ -0.7
TPM1-220ENST00000559556 HERPUD1Q15011 391 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 MICAQ29983 383 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms