RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 COMMD1Q8N668 190 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 RPS4Y2Q8TD47 263 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 C8orf44Q96CB5 159 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 SARGQ9BW04 601 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 HINT2Q9BX68 163 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 MAGT1Q9H0U3 335 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 FBXL17Q9UF56 701 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR14J1Q9UGF5 321 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 MGAMO43451 1857 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 TRBV5-5A0A0J9YX44 114 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 CEBPZOSA8MTT3 80 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 HOXD4P09016 255 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 LBX1P52954 281 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 RAB4BP61018 213 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 FZD2Q14332 565 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 TESK1Q15569 626 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 KISS1Q15726 138 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 ARTNQ5T4W7 220 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 KCNIP4Q6PIL6 250 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 PIGQQ9BRB3 760 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 PBX4Q9BYU1 374 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 SHARPINQ9H0F6 387 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 GAB2Q9UQC2 676 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 C4orf47A7E2U8 309 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 RER1O15258 196 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 FKBP2P26885 142 aaKnown RBP13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 BTCP35070 178 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR51H1Q8NH63 302 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 NUBPLQ8TB37 319 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 NANOS1Q8WY41 292 aaKnown RBP13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 PIK3IP1Q96FE7 263 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 RCL1Q9Y2P8 373 aaKnown RBP13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 ADAM10O14672 748 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 ANGPTL7O43827 346 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 SERPINA7P05543 415 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 GLAP06280 429 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 GABRG2P18507 467 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 GPR3P46089 330 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 SHBQ15464 509 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 FAM24BQ8N5W8 94 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 KLK13Q9UKR3 277 aa13.41□□□□□ -0.26
ARHGEF40-207ENST00000556399 IGHV5-51A0A0C4DH38 117 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 A0A1W2PPV4 95 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 KCNAB3O43448 404 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 VAMP5O95183 116 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 RFC3P40938 356 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 SUMO3P55854 103 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 UBE2NP61088 152 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 RPS15P62841 145 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 MYBPHQ13203 477 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 MSMO1Q15800 293 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 TFAP2EQ6VUC0 442 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 DUSP23Q9BVJ7 150 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 CDH20Q9HBT6 801 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 LPAR3Q9UBY5 353 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 TRAPPC2LQ9UL33 140 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR2A4O95047 310 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 CLDN1O95832 211 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 MT-ND4LP03901 98 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 RPS4Y1P22090 263 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 THBS4P35443 961 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 BATFQ16520 125 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 TM4SF19Q96DZ7 209 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR2A7Q96R45 310 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 MRPS18BQ9Y676 258 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 TNS1Q9HBL0 1735 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 LILRA5A6NI73 299 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 LINC01565O15544 149 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 UPK3AO75631 287 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 HPP00738 406 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 CRYBA1P05813 215 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 MCTS1Q9ULC4 181 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 DOCK4Q8N1I0 1966 aa13.4□□□□□ -0.26
ARHGEF40-207ENST00000556399 CYB5BO43169 146 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 SPRY1O43609 319 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 OR2J2O76002 312 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 F12P00748 615 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 NRASP01111 189 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 PTGFRP43088 359 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 HOXA1P49639 335 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 FUT7Q11130 342 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 LANCL3Q6ZV70 420 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 C15orf54Q8N8G6 183 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 PP6455Q8WZ26 134 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 MRPS24Q96EL2 167 aaKnown RBP13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 TOLLIPQ9H0E2 274 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZSWIM8A7E2V4 1837 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 SPP1P10451 314 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 GUCA2BQ16661 112 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 CST9LP1Q5W188 147 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZNF321PQ8N8H1 164 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 SOCS1O15524 211 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 ZIC2O95409 532 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 TXNDC12O95881 172 aa13.39□□□□□ -0.27
ARHGEF40-207ENST00000556399 TAS2R30P59541 319 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms