RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 MED30Q96HR3 178 aa13.56□□□□□ -0.24
CPSF7-225ENST00000545934 FGF23Q9GZV9 251 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-225ENST00000545934 FAM234AQ9H0X4 552 aa13.56□□□□□ -0.24
CPSF7-225ENST00000545934 IL20Q9NYY1 176 aa13.56□□□□□ -0.24
CPSF7-225ENST00000545934 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-225ENST00000545934 DNAH9Q9NYC9 4486 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 CHST1O43916 411 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 ACAA1P09110 424 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-225ENST00000545934 RRM2P31350 389 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 FMO3P31513 532 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 DCTDP32321 178 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 SLC25A1P53007 311 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 LOXL3P58215 753 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 LY6EQ16553 131 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 LRRC75BQ2VPJ9 315 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 OXLD1Q5BKU9 147 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 OR52H1Q8NGJ2 320 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 PIFOQ8TCI5 191 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 MRAPQ8TCY5 172 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 RNF133Q8WVZ7 376 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 DUS3LQ96G46 650 aaKnown RBP13.55□□□□□ -0.24
CPSF7-225ENST00000545934 MICU1Q9BPX6 476 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 SNTG1Q9NSN8 517 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 NECAP2Q9NVZ3 263 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 ZNF391Q9UJN7 358 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 MPC1Q9Y5U8 109 aa13.55□□□□□ -0.24
CPSF7-225ENST00000545934 TMEM210A6NLX4 147 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 GYPBP06028 91 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 ANXA2P07355 339 aaKnown RBP13.54□□□□□ -0.24
CPSF7-225ENST00000545934 SPI1P17947 270 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 CFL1P23528 166 aaKnown RBP13.54□□□□□ -0.24
CPSF7-225ENST00000545934 SLC15A1P46059 708 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 IL5RAQ01344 420 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 CRMP1Q14194 572 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 LINC01590Q5TEZ4 76 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 LIAT1Q6ZQX7 453 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 OR52L1Q8NGH7 329 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 OR51G2Q8NGK0 314 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 WIPF2Q8TF74 440 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-225ENST00000545934 OR5P3Q8WZ94 311 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 RPL3LQ92901 407 aaKnown RBP13.54□□□□□ -0.24
CPSF7-225ENST00000545934 RTL8AQ9BWD3 113 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 PAPOLGQ9BWT3 736 aaKnown RBP13.54□□□□□ -0.24
CPSF7-225ENST00000545934 CCDC134Q9H6E4 229 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 SP140LQ9H930 580 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 SPAG4Q9NPE6 437 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 AURKAIP1Q9NWT8 199 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-225ENST00000545934 ZNF222Q9UK12 451 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 SF3B6Q9Y3B4 125 aaKnown RBP13.54□□□□□ -0.24
CPSF7-225ENST00000545934 V9GYQ6 96 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
CPSF7-225ENST00000545934 A0A1W2PQ09 198 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 ADARB2-AS1A8MUL3 147 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 XPNPEP2O43895 674 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 CCDC22O60826 627 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 SASH3O75995 380 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 CST4P01036 141 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 APOC1P02654 83 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 CLUP10909 449 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 GNALP38405 381 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 HMGA2P52926 109 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 ZNF121P58317 390 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-225ENST00000545934 PRDX4Q13162 271 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 BLMHQ13867 455 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 SNCBQ16143 134 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 ZNF770Q6IQ21 691 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-225ENST00000545934 FAM57BQ71RH2 274 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 OR5D13Q8NGL4 314 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 HPSE2Q8WWQ2 592 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 CLPTM1LQ96KA5 538 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 BTBD10Q9BSF8 475 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 RGCCQ9H4X1 137 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 ELL3Q9HB65 397 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-225ENST00000545934 IL1RAPQ9NPH3 570 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 SERTAD4Q9NUC0 356 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 NLKQ9UBE8 527 aa13.53□□□□□ -0.24
CPSF7-225ENST00000545934 IGKV1D-17A0A075B6S4 117 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 ANXA2P2A6NMY6 339 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 OR2AT4A6NND4 320 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 AKR7A2O43488 359 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 FABP3P05413 133 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 NDUFB7P17568 137 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 ACKR3P25106 362 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 PAX6P26367 422 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 HSD11B1P28845 292 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 GMFBP60983 142 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 EIF2B1Q14232 305 aaKnown RBP13.52□□□□□ -0.25
CPSF7-225ENST00000545934 RASSF6Q6ZTQ3 369 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 KRT74Q7RTS7 529 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 Q8N2B8 174 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 FTMTQ8N4E7 242 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 C11orf42Q8N5U0 333 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 RNF148Q8N7C7 305 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 DTX3Q8N9I9 347 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 OR9Q2Q8NGE9 314 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 OR4Q3Q8NH05 313 aa13.52□□□□□ -0.25
CPSF7-225ENST00000545934 AMELYQ99218 206 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms