RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 M0R135 149 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 IMPA2O14732 288 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 GLRA1P23415 457 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 HTR1DP28221 377 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 IFNA8P32881 189 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 KIR3DL2P43630 455 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 GYS2P54840 703 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 GMFBP60983 142 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 ELF3P78545 371 aaPredicted RBP7.42□□□□□ -1.22
YBX3-211ENST00000541351 TRAP1Q12931 704 aaKnown RBP7.42□□□□□ -1.22
YBX3-211ENST00000541351 SCARB2Q14108 478 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 KRT72Q14CN4 511 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 HAGHQ16775 308 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 TIGD6Q17RP2 521 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 PNLIPRP3Q17RR3 467 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 DEFB136Q30KP8 78 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 TMEM200BQ69YZ2 307 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 ACSM6Q6P461 480 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.42□□□□□ -1.22
YBX3-211ENST00000541351 C11orf53Q8IXP5 236 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 LNX2Q8N448 690 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 ZNRF1Q8ND25 227 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 OR56B2PQ8NGI1 322 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 OR6T1Q8NGN1 323 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 OR2AJ1Q8NGZ0 328 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 OR2T27Q8NH04 317 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 MZB1Q8WU39 189 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 TMEM239Q8WW34 195 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 RASSF5Q8WWW0 418 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 ZNF799Q96GE5 643 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 RTL8AQ9BWD3 113 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 PARD6BQ9BYG5 372 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 POLR2J2Q9GZM3 115 aaKnown RBP7.42□□□□□ -1.22
YBX3-211ENST00000541351 POLR2J3Q9H1A7 115 aaKnown RBP7.42□□□□□ -1.22
YBX3-211ENST00000541351 TLNRD1Q9H1K6 362 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 RABEP2Q9H5N1 569 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 RERGLQ9H628 205 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 TUBA4BQ9H853 241 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 VIPAS39Q9H9C1 493 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 ELL3Q9HB65 397 aaPredicted RBP7.42□□□□□ -1.22
YBX3-211ENST00000541351 CXorf65A6NEN9 183 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 C17orf98A8MV24 154 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 XRCC2O43543 280 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 SLC16A7O60669 478 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 ELANEP08246 267 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 FAM106CPP0CH98 169 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 CEACAM3P40198 252 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 MNDAP41218 407 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 CSNK2BP67870 215 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 HIST1H3AP68431 136 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 MXRA7P84157 204 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 ZNF92Q03936 586 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 FOXE3Q13461 319 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 FHL3Q13643 280 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 KCNMB1Q16558 191 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 SLC36A3Q495N2 470 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 HIST2H3PS2Q5TEC6 136 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 CCDC144NLQ6NUI1 221 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 HIST2H3AQ71DI3 136 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 THAP5Q7Z6K1 395 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 SLC35E3Q7Z769 313 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 EGFL6Q8IUX8 553 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 PGAM4Q8N0Y7 254 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 ZNF561Q8N587 486 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 OR11H1Q8NG94 326 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 IFT81Q8WYA0 676 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 VPS33AQ96AX1 596 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 SEH1LQ96EE3 360 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 SDSLQ96GA7 329 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 TMEM38AQ9H6F2 299 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 AIG1Q9NVV5 245 aa7.41□□□□□ -1.22
YBX3-211ENST00000541351 H3BSH0 61 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 H7C1C5 153 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 AP4M1O00189 453 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 OVOL1O14753 267 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 RIPK2O43353 540 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 ZNF728P0DKX0 622 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 CCL3L1P16619 93 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 CFL1P23528 166 aaKnown RBP7.4□□□□□ -1.22
YBX3-211ENST00000541351 CRABP1P29762 137 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 MDH1P40925 334 aaKnown RBP7.4□□□□□ -1.22
YBX3-211ENST00000541351 GPR12P47775 334 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 CENPAP49450 140 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 TAS2R41P59536 307 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 LCN6P62502 163 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 MFGE8Q08431 387 aaPredicted RBP7.4□□□□□ -1.22
YBX3-211ENST00000541351 KRTAP27-1Q3LI81 207 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 AGBL2Q5U5Z8 902 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 LGALS9CQ6DKI2 356 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 SLC2A7Q6PXP3 512 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 DRAM2Q6UX65 266 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 STPG2Q8N412 459 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 SMYD1Q8NB12 490 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 CSNK2A3Q8NEV1 391 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 PFN4Q8NHR9 129 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 SLC26A7Q8TE54 656 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 TSEN15Q8WW01 171 aaKnown RBP7.4□□□□□ -1.22
YBX3-211ENST00000541351 ZNF570Q96NI8 536 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 WDR13Q9H1Z4 485 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 SP140LQ9H930 580 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms